RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 FMODQ06828 376 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 CD47Q08722 323 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 TOP3AQ13472 1001 aaPredicted RBP13.82□□□□□ -0.2
USE1-201ENST00000263897 SGCAQ16586 387 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 C6orf52Q5T4I8 152 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 FAM27BQ5VT28 67 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 FAM205BPQ63HN1 556 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 IGFN1Q86VF2 1251 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 ZNF786Q8N393 782 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 PAQR4Q8N4S7 273 aaPredicted RBP13.82□□□□□ -0.2
USE1-201ENST00000263897 OR1J2Q8NGS2 313 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 FNDC8Q8TC99 324 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 UBASH3BQ8TF42 649 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 NSMAFQ92636 917 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 NABP1Q96AH0 204 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 C7orf34Q96L11 122 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 SYT3Q9BQG1 590 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 CDH20Q9HBT6 801 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 DCAF13Q9NV06 445 aaKnown RBP13.82□□□□□ -0.2
USE1-201ENST00000263897 DUSP13Q9UII6 198 aa13.82□□□□□ -0.2
USE1-201ENST00000263897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.81□□□□□ -0.28e-8■■■□□ 16.9
USE1-201ENST00000263897 A6NIZ1 184 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 M0R233 179 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 CDC42EP2O14613 210 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 SNAP29O95721 258 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 FAM157BP0CG42 384 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 GZMKP49863 264 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 GYS2P54840 703 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 RAP1BP61224 184 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 RAP1AP62834 184 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 ZBED5Q49AG3 693 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 IQCCQ4KMZ1 466 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 PABPC1L2AQ5JQF8 200 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 PODNL1Q6PEZ8 512 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 RNF148Q8N7C7 305 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 CLDN22Q8N7P3 220 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 ARIH2OSQ8N7S6 290 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 FAM156AQ8NDB6 213 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 CPEB3Q8NE35 698 aaKnown RBP13.81□□□□□ -0.2
USE1-201ENST00000263897 OR13C2Q8NGS9 318 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 ZNF519Q8TB69 540 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 SLC7A13Q8TCU3 470 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 TSPAN32Q96QS1 320 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 LRMDAQ9H2I8 198 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 TPK1Q9H3S4 243 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 GORASP2Q9H8Y8 452 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 CCNB1IP1Q9NPC3 277 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 NDUFAF4Q9P032 175 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 MYEF2Q9P2K5 600 aaKnown RBP13.81□□□□□ -0.2
USE1-201ENST00000263897 FZR1Q9UM11 496 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 FAM32AQ9Y421 112 aaKnown RBP13.81□□□□□ -0.2
USE1-201ENST00000263897 COL6A5A8TX70 2615 aa13.81□□□□□ -0.2
USE1-201ENST00000263897 IGHV4-61A0A0C4DH41 118 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 A0A1W2PRQ8 180 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 PTP4A3O75365 173 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 GMNNO75496 209 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 H1F0P07305 194 aaKnown RBP13.8□□□□□ -0.2
USE1-201ENST00000263897 ZNF32P17041 273 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 RHCEP18577 417 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 APEX1P27695 318 aaKnown RBP13.8□□□□□ -0.2
USE1-201ENST00000263897 RAD52P43351 418 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 ALDH3B1P43353 468 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 GPR4P46093 362 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 UCP2P55851 309 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 ERVK-25P63136 954 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 HSF2Q03933 536 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 DGCR6Q14129 220 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 TBC1D28Q2M2D7 210 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 RGS7BPQ6MZT1 257 aaPredicted RBP13.8□□□□□ -0.2
USE1-201ENST00000263897 PIGWQ7Z7B1 504 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 BPESC1Q9GZL8 116 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 TMEM160Q9NX00 188 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 SAMD4AQ9UPU9 718 aaKnown RBP13.8□□□□□ -0.2
USE1-201ENST00000263897 TMEM5Q9Y2B1 443 aa13.8□□□□□ -0.2
USE1-201ENST00000263897 CD14P08571 375 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 APEHP13798 732 aaKnown RBP13.79□□□□□ -0.2
USE1-201ENST00000263897 ZNF250P15622 560 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 ZNF23P17027 643 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 ZNF26P17031 533 aaPredicted RBP13.79□□□□□ -0.2
USE1-201ENST00000263897 TCN1P20061 433 aaPredicted RBP13.79□□□□□ -0.2
USE1-201ENST00000263897 APLNRP35414 380 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 RPL4P36578 427 aaKnown RBP13.79□□□□□ -0.2
USE1-201ENST00000263897 GUCA1AP43080 201 aaPredicted RBP13.79□□□□□ -0.2
USE1-201ENST00000263897 SELENOVP59797 346 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 GNGT1P63211 74 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 PSG4Q00888 419 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 RIN1Q13671 783 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 MAD2L1BPQ15013 274 aaPredicted RBP13.79□□□□□ -0.2
USE1-201ENST00000263897 CHRFAM7AQ494W8 412 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 FAM86B1Q8N7N1 296 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 C11orf40Q8WZ69 217 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 BCL2L14Q9BZR8 327 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 GRHPRQ9UBQ7 328 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 CD300AQ9UGN4 299 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 ARL2BPQ9Y2Y0 163 aa13.79□□□□□ -0.2
USE1-201ENST00000263897 IGLV3-9A0A075B6K5 115 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 LYNX1G3V0Z9 82 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 AHCYL1O43865 530 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 LMX1BO60663 402 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 LILRA1O75019 489 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms