RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 THAP5Q7Z6K1 395 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 ENTHD1Q8IYW4 607 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 ZIC4Q8N9L1 334 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 OR52E2Q8NGJ4 325 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 CITED4Q96RK1 184 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 TXNIPQ9H3M7 391 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 FN3KQ9H479 309 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 MED20Q9H944 212 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 TINAGQ9UJW2 476 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 RP1L1Q8IWN7 2480 aaPredicted RBP24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 ZNF99A8MXY4 864 aaPredicted RBP24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 CLDN17P56750 224 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 RPL27P61353 136 aaKnown RBP24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 S100A12P80511 92 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 IL5RAQ01344 420 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 CARD17Q5XLA6 110 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 CASP12Q6UXS9 341 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 LRRC20Q8TCA0 184 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 NMNAT3Q96T66 252 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 FANCFQ9NPI8 374 aa24.42■■□□□ 1.5
SMARCD3-201ENST00000262188 LINC00854A0A1B0GVQ3 168 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 ZNF254O75437 659 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 SDHAP31040 664 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 UGT2B10P36537 528 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 ACVR1BP36896 505 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 CDKN2AP42771 156 aaKnown RBP24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 CARTPTQ16568 116 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 GCNT2Q8N0V5 402 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 CNIH3Q8TBE1 160 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 OTULINQ96BN8 352 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 SLIRPQ9GZT3 109 aaKnown RBP24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 IMPAD1Q9NX62 359 aa24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 EIF3KQ9UBQ5 218 aaKnown RBP24.41■■□□□ 1.5
SMARCD3-201ENST00000262188 A0A0G2JMP0 313 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 TLX2O43763 284 aaPredicted RBP24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 SLC19A2O60779 497 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 ERP29P30040 261 aaKnown RBP24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 GRK5P34947 590 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 ARMC4Q5T2S8 1044 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 P4HA3Q7Z4N8 544 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 TUSC5Q8IXB3 177 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 C9orf106Q8NAJ2 232 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 ZNF519Q8TB69 540 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 SETD6Q8TBK2 473 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 ASB10Q8WXI3 467 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 HCAR1Q9BXC0 346 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 FAM215AQ9Y5M1 114 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 FLVCR1Q9Y5Y0 555 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 PMF1-BGLAPU3KQ54 211 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 RELNP78509 3460 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 SLC35F4A4IF30 521 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 IL7P13232 177 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 EDN3P14138 238 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 EDNRAP25101 427 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 CDC42P60953 191 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 CAMK2DQ13557 499 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 CRMP1Q14194 572 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 SEM1Q6ZVN7 128 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 DOLPP1Q86YN1 238 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 SYT14Q8NB59 555 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 IFT22Q9H7X7 185 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 CALHM2Q9HA72 323 aa24.4■■□□□ 1.5
SMARCD3-201ENST00000262188 MED12LQ86YW9 2145 aa24.39■■□□□ 1.5
SMARCD3-201ENST00000262188 CTDSP2O14595 271 aa24.39■■□□□ 1.49
SMARCD3-201ENST00000262188 ARPC3O15145 178 aa24.39■■□□□ 1.49
SMARCD3-201ENST00000262188 LGALS3BPQ08380 585 aa24.39■■□□□ 1.49
SMARCD3-201ENST00000262188 IKZF1Q13422 519 aa24.39■■□□□ 1.49
SMARCD3-201ENST00000262188 PXDC1Q5TGL8 231 aa24.39■■□□□ 1.49
SMARCD3-201ENST00000262188 ARIH2OSQ8N7S6 290 aa24.39■■□□□ 1.49
SMARCD3-201ENST00000262188 BBS1Q8NFJ9 593 aa24.39■■□□□ 1.49
SMARCD3-201ENST00000262188 NBASA2RRP1 2371 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 AHRRA9YTQ3 701 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 VAMP5O95183 116 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 IGHMP01871 453 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 CLUP10909 449 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 SELENOPP49908 381 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 ISL1P61371 349 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 CD47Q08722 323 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 LEG1Q6P5S2 330 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 C8orf59Q8N0T1 100 aaPredicted RBP24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 SLC37A3Q8NCC5 494 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 ZFAND1Q8TCF1 268 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 TSSK2Q96PF2 358 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 APOL4Q9BPW4 351 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 HINT3Q9NQE9 182 aaKnown RBP24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 CMC2Q9NRP2 79 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 LOC102725191A0A1B0GVB3 256 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 ATP6V1G2-DDX39BF2Z307 99 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 EFNB1P98172 346 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 POU4F3Q15319 338 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 SMN1Q16637 294 aaKnown RBP24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 CLVS2Q5SYC1 327 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 GDPD3Q7L5L3 318 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 OR9Q1Q8NGQ5 310 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 APH1BQ8WW43 257 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 SLC38A2Q96QD8 506 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 SF3B5Q9BWJ5 86 aaKnown RBP24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 RNF122Q9H9V4 155 aa24.38■■□□□ 1.49
SMARCD3-201ENST00000262188 DNAJC27Q9NZQ0 273 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms