RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CTXN2P0C2S0 81 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 P0C879 139 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ANXA3P12429 323 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ATP1B2P14415 290 aaPredicted RBP3.24□□□□□ -1.89
CCDC54-201ENST00000261058 G0S2P27469 103 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 IL12BP29460 328 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 NPBWR2P48146 333 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 EFNB2P52799 333 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ACLYP53396 1101 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 RPL8P62917 257 aaKnown RBP3.24□□□□□ -1.89
CCDC54-201ENST00000261058 RAD51Q06609 339 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 TSPAN31Q12999 210 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ILKQ13418 452 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 PEX6Q13608 980 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 GK3PQ14409 553 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 SMCO1Q147U7 214 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 PDK2Q15119 407 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CYTH1Q15438 398 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 SLC15A2Q16348 729 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 MARC1Q5VT66 337 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 SLC8B1Q6J4K2 584 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CYS1Q717R9 158 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 SMIM15Q7Z3B0 74 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ABHD12BQ7Z5M8 362 aaPredicted RBP3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CYP4Z1Q86W10 505 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 SERPINA9Q86WD7 417 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF786Q8N393 782 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CSNK1A1LQ8N752 337 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 C8orf31Q8N9H6 132 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 MFSD9Q8NBP5 474 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 TMEM104Q8NE00 496 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 OR4A15Q8NGL6 344 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 OR9A4Q8NGU2 314 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 OR1F12Q8NHA8 337 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 KCTD4Q8WVF5 259 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 NAT6Q93015 286 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 TADA1Q96BN2 335 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 HAUS1Q96CS2 278 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 B3GALT6Q96L58 329 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CSPG4P5Q96PW8 444 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 OR5M11Q96RB7 305 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 PELOQ9BRX2 385 aaKnown RBP3.24□□□□□ -1.89
CCDC54-201ENST00000261058 TSSK1BQ9BXA7 367 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ROGDIQ9GZN7 287 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 SLITRK2Q9H156 845 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CCNB1IP1Q9NPC3 277 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 PXMP2Q9NR77 195 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 TREX1Q9NSU2 369 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 FAIMQ9NVQ4 179 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 IFNKQ9P0W0 207 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ABCD2Q9UBJ2 740 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 CLN8Q9UBY8 286 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 NAGKQ9UJ70 344 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 FLVCR2Q9UPI3 526 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 POLDIP2Q9Y2S7 368 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 STARD10Q9Y365 291 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 KIF25-AS1Q9Y6Z4 181 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 MN1Q10571 1320 aaPredicted RBP3.24□□□□□ -1.89
CCDC54-201ENST00000261058 UBN2Q6ZU65 1347 aa3.24□□□□□ -1.89
CCDC54-201ENST00000261058 ATRXP46100 2492 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 IGLV3-10A0A075B6K4 115 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 CCDC182A6NF36 153 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 LRRN3E7EW58 273 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 E7EWF7 191 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 RNASEK-C17orf49H0YIS7 233 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 CASKO14936 926 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 RAB29O14966 203 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 SCAMP2O15127 329 aaKnown RBP3.23□□□□□ -1.89
CCDC54-201ENST00000261058 SLC22A1O15245 554 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 OR10H3O60404 316 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 CD55P08174 381 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 NCK1P16333 377 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 ZP3P21754 424 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 MAGEA2P43356 314 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 UQCRFS1P47985 274 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 CDK9P50750 372 aaKnown RBP3.23□□□□□ -1.89
CCDC54-201ENST00000261058 P2RY4P51582 365 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 RIPPLY3P57055 190 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 AP3S2P59780 193 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 OSTNP61366 133 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 CD47Q08722 323 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF154Q13106 437 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 SLAMF1Q13291 335 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 PRR4Q16378 134 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 GSG1Q2KHT4 349 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 GOLGA7BQ2TAP0 167 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 BEND3Q5T5X7 828 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 STUMQ69YW2 141 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 ASCL4Q6XD76 172 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 DHDDSQ86SQ9 333 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 MMAAQ8IVH4 418 aaKnown RBP3.23□□□□□ -1.89
CCDC54-201ENST00000261058 BBS7Q8IWZ6 715 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 SELENOHQ8IZQ5 122 aaKnown RBP3.23□□□□□ -1.89
CCDC54-201ENST00000261058 PDIK1LQ8N165 341 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 UBL4BQ8N7F7 174 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 ATP6V0D2Q8N8Y2 350 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 TCP10LQ8TDR4 215 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 C9orf72Q96LT7 481 aa3.23□□□□□ -1.89
CCDC54-201ENST00000261058 JSRP1Q96MG2 331 aaPredicted RBP3.23□□□□□ -1.89
CCDC54-201ENST00000261058 IL4I1Q96RQ9 567 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms