RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ESPNLQ6ZVH7 1005 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 TCF24Q7RTU0 167 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF511Q8NB15 262 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 RNASE11Q8TAA1 199 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 STK35Q8TDR2 534 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 FNDC11Q9BVV2 318 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 PRORYQ9H606 182 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ADAP2Q9NPF8 381 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 KLHL21Q9UJP4 597 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 MEIOCA2RUB1 952 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF3P17036 446 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 RHCEP18577 417 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ALDH9A1P49189 494 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 CHN2P52757 468 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 MYBPHQ13203 477 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 IGFL3Q6UXB1 125 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ZDHHC13Q8IUH4 622 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 C8orf59Q8N0T1 100 aaPredicted RBP4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ATG16L2Q8NAA4 619 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 CAPSLQ8WWF8 208 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 XAGE5Q8WWM1 108 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 PINK1Q9BXM7 581 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 TRIM2Q9C040 744 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 RASSF1Q9NS23 344 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 NPFFR2Q9Y5X5 522 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 FLVCR1Q9Y5Y0 555 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 IGKV3D-15A0A087WSY6 115 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 VGLL3A8MV65 326 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 TP53I11O14683 189 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ICAM2P13598 275 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ATP6V1B1P15313 513 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 RPS2P15880 293 aaKnown RBP4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 RCVRNP35243 200 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 PMELP40967 661 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 BLVRAP53004 296 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 RBBP4Q09028 425 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF267Q14586 743 aaPredicted RBP4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ARL6IP1Q15041 203 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 DECR1Q16698 335 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 RAB43Q86YS6 212 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 PLCZ1Q86YW0 608 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 OR5H6Q8NGV6 325 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 C9orf43Q8TAL5 461 aaPredicted RBP4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ABTB1Q969K4 478 aaPredicted RBP4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ZDHHC12Q96GR4 267 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 TUBA1CQ9BQE3 449 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 EMC6Q9BV81 110 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 YTHDF1Q9BYJ9 559 aaKnown RBP4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 POLE4Q9NR33 117 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 COMMD9Q9P000 198 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF391Q9UJN7 358 aa4.9□□□□□ -1.62
TOPBP1-201ENST00000260810 TRABD2BA6NFA1 517 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 FAM171A2A8MVW0 826 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 FMO6PO60774 539 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 PPM1BO75688 479 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 NCR1O76036 304 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 CST1P01037 141 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 PRB1P04280 392 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 CDK1P06493 297 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 TACSTD2P09758 323 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 IL12BP29460 328 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 CAPGP40121 348 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 AQP2P41181 271 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 BMXP51813 675 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 OR12D2P58182 307 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 TSC22D1Q15714 1073 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 GCNT6Q5T4J0 391 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 PRAMEF20Q5VT98 475 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 PAPD4Q6PIY7 484 aaKnown RBP4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 ARL9Q6T311 187 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 BAIAP2L2Q6UXY1 529 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 RTL4Q6ZR62 310 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 ABHD12BQ7Z5M8 362 aaPredicted RBP4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 MINDY2Q8NBR6 621 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 FAM122AQ96E09 287 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 SAMD8Q96LT4 415 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 CD180Q99467 661 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 TP63Q9H3D4 680 aaPredicted RBP4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 B3GNT3Q9Y2A9 372 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 A0A1W2PNV4 684 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 OVOL3O00110 214 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 PHYHO14832 338 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 SCGNO76038 276 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 BMP4P12644 408 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 ALOX5APP20292 161 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 KLHL22Q53GT1 634 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 EEF1A1P5Q5VTE0 462 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF660Q6AZW8 331 aaPredicted RBP4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC29A4Q7RTT9 530 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 ARMC8Q8IUR7 673 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 ZFP41Q8N8Y5 198 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 RNF170Q96K19 258 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 ALPK1Q96QP1 1244 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 HOXD1Q9GZZ0 328 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 P4HTMQ9NXG6 502 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 HAO2Q9NYQ3 351 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 NCDNQ9UBB6 729 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 PCDHGA1Q9Y5H4 931 aa4.9□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC35F4A4IF30 521 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms