RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SLC25A44Q96H78 314 aaPredicted RBP19.93■□□□□ 0.78
SIX3-201ENST00000260653 RASD1Q9Y272 281 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 CASKO14936 926 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 UPK3AO75631 287 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 IGHG1P01857 330 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 ENPP1P22413 925 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 CLRN1P58418 232 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 ZNF846Q147U1 533 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 MDS2Q8NDY4 140 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 OR6X1Q8NH79 312 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 S100ZQ8WXG8 99 aa19.93■□□□□ 0.78
SIX3-201ENST00000260653 OR5H15A6NDH6 313 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 SC5DO75845 299 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 CELA3AP09093 270 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 TRAM1Q15629 374 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 INAQ16352 499 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 KCTD20Q7Z5Y7 419 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 RBP7Q96R05 134 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 SLCO1C1Q9NYB5 712 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 A0A087WV48 116 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 CTDSP2O14595 271 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 KHDRBS3O75525 346 aaKnown RBP19.92■□□□□ 0.78
SIX3-201ENST00000260653 GAAP10253 952 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 GFRA1P56159 465 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 EGR3Q06889 387 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 GALNTL5Q7Z4T8 443 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 TTTY12Q9BZ98 90 aa19.92■□□□□ 0.78
SIX3-201ENST00000260653 WDR12Q9GZL7 423 aaKnown RBP19.92■□□□□ 0.78
SIX3-201ENST00000260653 A0A075B6Q4 140 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 FAM166BA8MTA8 275 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 SULT1C4O75897 302 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 TACSTD2P09758 323 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 HOXD11P31277 338 aaPredicted RBP19.91■□□□□ 0.78
SIX3-201ENST00000260653 S100A5P33763 92 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 SUCLG1P53597 346 aaKnown RBP19.91■□□□□ 0.78
SIX3-201ENST00000260653 CLDN17P56750 224 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 LRRN1Q6UXK5 716 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 CEACAM19Q7Z692 300 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 MS4A15Q8N5U1 240 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 NAA11Q9BSU3 229 aaPredicted RBP19.91■□□□□ 0.78
SIX3-201ENST00000260653 SMURF1Q9HCE7 757 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 QPCTLQ9NXS2 382 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 PLEKHB1Q9UF11 243 aaPredicted RBP19.91■□□□□ 0.78
SIX3-201ENST00000260653 CENPBD1B2RD01 187 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 BOLA2-SMG1P6H3BVE0 249 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 PHYHO14832 338 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 NCR1O76036 304 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 WNT11O96014 354 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 SP1P08047 785 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 POU3F2P20265 443 aaPredicted RBP19.91■□□□□ 0.78
SIX3-201ENST00000260653 SOX8P57073 446 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 ACSM3Q53FZ2 586 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 HBMQ6B0K9 141 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 SLC18B1Q6NT16 456 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 RPS4Y2Q8TD47 263 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 OCEL1Q9H607 264 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 ZNF552Q9H707 407 aaPredicted RBP19.91■□□□□ 0.78
SIX3-201ENST00000260653 B4GALT7Q9UBV7 327 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 PEX16Q9Y5Y5 336 aa19.91■□□□□ 0.78
SIX3-201ENST00000260653 ZNF407Q9C0G0 2248 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 RPS11P62280 158 aaKnown RBP eCLIP19.9■□□□□ 0.78
SIX3-201ENST00000260653 THEM4Q5T1C6 240 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 SPATC1Q76KD6 591 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 HDDC2Q7Z4H3 204 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 A0A1B0GTH9 108 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 SMAD9O15198 467 aaKnown RBP19.9■□□□□ 0.78
SIX3-201ENST00000260653 NME2P1O60361 137 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 NME2P22392 152 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 MAGEA5P43359 124 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 AGFG1P52594 562 aaKnown RBP19.9■□□□□ 0.78
SIX3-201ENST00000260653 CLDN15P56746 228 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 RAC3P60763 192 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 EIF2B1Q14232 305 aaKnown RBP19.9■□□□□ 0.78
SIX3-201ENST00000260653 RTP5Q14D33 572 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 CREB3L2Q70SY1 520 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 ADGRG7Q96K78 797 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 ZNF385AQ96PM9 386 aaKnown RBP19.9■□□□□ 0.78
SIX3-201ENST00000260653 OR8B4Q96RC9 309 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 TTYH2Q9BSA4 534 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 ABHD6Q9BV23 337 aa19.9■□□□□ 0.78
SIX3-201ENST00000260653 DNAJC13O75165 2243 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 ZNF726A6NNF4 738 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 ZFPL1O95159 310 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 CARD18P57730 90 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 CLN3Q13286 438 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 MFAP5Q13361 173 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 SLC25A25Q6KCM7 469 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 ESPNLQ6ZVH7 1005 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 GLB1L2Q8IW92 636 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 KLF13Q9Y2Y9 288 aaPredicted RBP19.89■□□□□ 0.77
SIX3-201ENST00000260653 URB1O60287 2271 aaKnown RBP19.89■□□□□ 0.77
SIX3-201ENST00000260653 DCHS1Q96JQ0 3298 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 PHF3Q92576 2039 aaKnown RBP19.89■□□□□ 0.77
SIX3-201ENST00000260653 IQCMA0A1B0GVH7 501 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 NPIPA2E9PIF3 369 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 NPIPA3F8WFD2 350 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 VAMP5O95183 116 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 ZNF823P16415 610 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 SLC17A1Q14916 467 aa19.89■□□□□ 0.77
SIX3-201ENST00000260653 LINC00346Q8IVM7 164 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms