RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 NEIL3Q8TAT5 605 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 PELI1Q96FA3 418 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 AGAP4Q96P64 663 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 UCN2Q96RP3 112 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 INTS14Q96SY0 518 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 ACOXLQ9NUZ1 547 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 MALT1Q9UDY8 824 aa16.87■□□□□ 0.29
TRIM47-201ENST00000254816 SEC14L5O43304 696 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 TMCC2O75069 709 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 MPZL1O95297 269 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 BDH1Q02338 343 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 CAMK2DQ13557 499 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 CDC20BQ86Y33 519 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 KLHL15Q96M94 604 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 SFXN2Q96NB2 322 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 MRPL22Q9NWU5 206 aaKnown RBP16.86■□□□□ 0.29
TRIM47-201ENST00000254816 CACNA1CQ13936 2221 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 CFAP47Q6ZTR5 3102 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 TRAF3IP2O43734 574 aaPredicted RBP16.86■□□□□ 0.29
TRIM47-201ENST00000254816 NKX2-5P52952 324 aaPredicted RBP16.86■□□□□ 0.29
TRIM47-201ENST00000254816 RRADP55042 308 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 ACTA2P62736 377 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 ACTG2P63267 376 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 PYDC2Q56P42 97 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 OXGR1Q96P68 337 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 SRXN1Q9BYN0 137 aa16.86■□□□□ 0.29
TRIM47-201ENST00000254816 TRABD2BA6NFA1 517 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 NPIPB13A6NJU9 1138 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 FAM166BA8MTA8 275 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 NPIPB4C9JG80 1138 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 EIF1AYO14602 144 aaKnown RBP16.85■□□□□ 0.29
TRIM47-201ENST00000254816 HPGDSO60760 199 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 HLA-DPB1P04440 258 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 CELA3AP09093 270 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 CSF3P09919 207 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 CCL11P51671 97 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 H3F3AP84243 136 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 CLN3Q13286 438 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 RTP5Q14D33 572 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 CARD17Q5XLA6 110 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 TMEM91Q6ZNR0 172 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 GALNTL5Q7Z4T8 443 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 AP3S1Q92572 193 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 KCNG2Q9UJ96 466 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 LAMP5Q9UJQ1 280 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 CDV3Q9UKY7 258 aaKnown RBP16.85■□□□□ 0.29
TRIM47-201ENST00000254816 DCHS1Q96JQ0 3298 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 OR5H15A6NDH6 313 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 OR8G3PP0DMU2 310 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 ZNF43P17038 809 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 SUCLG1P53597 346 aaKnown RBP16.85■□□□□ 0.29
TRIM47-201ENST00000254816 XKRXQ6PP77 449 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 LRRC69Q6ZNQ3 347 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 GGNQ86UU5 652 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 SYS1Q8N2H4 156 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 MDS2Q8NDY4 140 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 SETD6Q8TBK2 473 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 THEM6Q8WUY1 208 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 NSMAFQ92636 917 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 AMELYQ99218 206 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 ATF6BQ99941 703 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 OR2B2Q9GZK3 357 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 ZNF552Q9H707 407 aaPredicted RBP16.85■□□□□ 0.29
TRIM47-201ENST00000254816 ZNF703Q9H7S9 590 aaPredicted RBP16.85■□□□□ 0.29
TRIM47-201ENST00000254816 ST6GALNAC2Q9UJ37 374 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 POU2F3Q9UKI9 436 aa16.85■□□□□ 0.29
TRIM47-201ENST00000254816 PHF3Q92576 2039 aaKnown RBP16.85■□□□□ 0.29
TRIM47-201ENST00000254816 DCDC2BA2VCK2 349 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 ZNF593O00488 134 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-201ENST00000254816 ENPP1P22413 925 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 CRABP1P29762 137 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 NHLH1Q02575 133 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 ZNF239Q16600 458 aaKnown RBP16.84■□□□□ 0.29
TRIM47-201ENST00000254816 UTS2BQ765I0 119 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 UBE2J2Q8N2K1 259 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 TTTY12Q9BZ98 90 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 TFECO14948 347 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-201ENST00000254816 PLPP2O43688 288 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 SP1P08047 785 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 MAGEA5P43359 124 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 GBX2P52951 348 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-201ENST00000254816 KCNE4Q8WWG9 221 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 RNF32Q9H0A6 362 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRIM47-201ENST00000254816 MMP28Q9H239 520 aa16.84■□□□□ 0.29
TRIM47-201ENST00000254816 RPP14O95059 124 aaKnown RBP16.83■□□□□ 0.28
TRIM47-201ENST00000254816 SPARCP09486 303 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 APEX1P27695 318 aaKnown RBP16.83■□□□□ 0.28
TRIM47-201ENST00000254816 TAS2R43P59537 309 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 CSNK2A1P68400 391 aaPredicted RBP16.83■□□□□ 0.28
TRIM47-201ENST00000254816 ADAM8P78325 824 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 HSF2Q03933 536 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 SCN1BQ07699 218 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 GPR50Q13585 617 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 KCNJ8Q15842 424 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF684Q5T5D7 378 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 AGAP6Q5VW22 663 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 FAM205BPQ63HN1 556 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 DMKNQ6E0U4 476 aaPredicted RBP16.83■□□□□ 0.28
TRIM47-201ENST00000254816 SLC25A25Q6KCM7 469 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms