RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 FAUP35544 74 aaKnown RBP15.36■□□□□ 0.05
FOXA1-201ENST00000250448 SOX2P48431 317 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 GRM7Q14831 915 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 RBMS2Q15434 407 aaKnown RBP15.36■□□□□ 0.05
FOXA1-201ENST00000250448 NDUFAF6Q330K2 333 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 LINC01590Q5TEZ4 76 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 DNM1P46Q6ZS02 220 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 SLC36A1Q7Z2H8 476 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 FAM220AQ7Z4H9 259 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 NAXDQ8IW45 347 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 GLB1L2Q8IW92 636 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 HOXB13Q92826 284 aaPredicted RBP15.36■□□□□ 0.05
FOXA1-201ENST00000250448 ALG12Q9BV10 488 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 ARL6Q9H0F7 186 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.36■□□□□ 0.05
FOXA1-201ENST00000250448 RXFP3Q9NSD7 469 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 FXYD6-FXYD2A0A087WZ82 144 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 SLC22A23A1A5C7 686 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 PRKNO60260 465 aaPredicted RBP15.36■□□□□ 0.05
FOXA1-201ENST00000250448 ZNF35P13682 527 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 MAPK3P27361 379 aaPredicted RBP15.36■□□□□ 0.05
FOXA1-201ENST00000250448 CALCRP30988 508 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 GK2Q14410 553 aaPredicted RBP15.36■□□□□ 0.05
FOXA1-201ENST00000250448 C2orf68Q2NKX9 166 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 LRRTM1Q86UE6 522 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 TMPRSS12Q86WS5 348 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 OR4N2Q8NGD1 307 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 SEMA4CQ9C0C4 833 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 FXYD6Q9H0Q3 95 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 ARRDC1-AS1Q9H2J1 176 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 FGF21Q9NSA1 209 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 FBXO4Q9UKT5 387 aa15.36■□□□□ 0.05
FOXA1-201ENST00000250448 ATP6V1G2-DDX39BF2Z307 99 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 H2BFSP57053 126 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 PSG6Q00889 435 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 PCGF3Q3KNV8 242 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 LEG1Q6P5S2 330 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 CORO6Q6QEF8 472 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 LRRN1Q6UXK5 716 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 D2HGDHQ8N465 521 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 OR4C16Q8NGL9 310 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 MS4A7Q9GZW8 240 aaPredicted RBP15.35■□□□□ 0.05
FOXA1-201ENST00000250448 PRTFDC1Q9NRG1 225 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 MED11Q9P086 117 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 ZNF337Q9Y3M9 751 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 R4GN57 208 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 GDF9O60383 454 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 PGDP52209 483 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 OC90Q02509 493 aaPredicted RBP15.35■□□□□ 0.05
FOXA1-201ENST00000250448 LTBQ06643 244 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 PLA2G7Q13093 441 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 ALKBH1Q13686 389 aaKnown RBP15.35■□□□□ 0.05
FOXA1-201ENST00000250448 ISXQ2M1V0 245 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 GSG1LQ6UXU4 331 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 OR5AK2Q8NH90 309 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 SLC41A2Q96JW4 573 aa15.35■□□□□ 0.05
FOXA1-201ENST00000250448 F5H5P2 479 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 H7C417 338 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 FGF2P09038 288 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 HSD17B7P56937 341 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 OR7E24Q6IFN5 339 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 WDR74Q6RFH5 385 aaPredicted RBP15.34■□□□□ 0.05
FOXA1-201ENST00000250448 TFAP2EQ6VUC0 442 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 ZNF511Q8NB15 262 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 OR2AK2Q8NG84 335 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 Q96M85 177 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 LMF2Q9BU23 707 aaKnown RBP15.34■□□□□ 0.05
FOXA1-201ENST00000250448 MTFP1Q9UDX5 166 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 KLHDC2Q9Y2U9 406 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 CLDN16Q9Y5I7 305 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 A0A087WUJ7 227 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 TRBV5-5A0A0J9YX44 114 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 TMEM72A0PK05 275 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 ANXA2P2A6NMY6 339 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 LGALS8O00214 317 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 GOSR2O14653 212 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 UPK3AO75631 287 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 RBBP9O75884 186 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 RLN1P04808 185 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 TACSTD2P09758 323 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 POLR2GP62487 172 aaKnown RBP eCLIP15.34■□□□□ 0.05
FOXA1-201ENST00000250448 ZNF273Q14593 569 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 NNATQ16517 81 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 PEAR1Q5VY43 1037 aaPredicted RBP15.34■□□□□ 0.05
FOXA1-201ENST00000250448 ZC4H2Q9NQZ6 224 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 GLS2Q9UI32 602 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 MRM2Q9UI43 246 aaKnown RBP15.34■□□□□ 0.05
FOXA1-201ENST00000250448 ZNF346Q9UL40 294 aaKnown RBP15.34■□□□□ 0.05
FOXA1-201ENST00000250448 FITM1A5D6W6 292 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 C4orf47A7E2U8 309 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 ANXA2P07355 339 aaKnown RBP15.34■□□□□ 0.05
FOXA1-201ENST00000250448 AVPR2P30518 371 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 ZNHIT3Q15649 155 aaPredicted RBP15.34■□□□□ 0.05
FOXA1-201ENST00000250448 TMEM71Q6P5X7 295 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 SHISA6Q6ZSJ9 500 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 SLC16A9Q7RTY1 509 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 ZNF227Q86WZ6 799 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 BVESQ8NE79 360 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 DTX4Q9Y2E6 619 aa15.34■□□□□ 0.05
FOXA1-201ENST00000250448 XRCC3O43542 346 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms