RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PDLIM3Q53GG5 364 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 FGD3Q5JSP0 725 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 C1orf229Q6ZS94 237 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 CREB3L2Q70SY1 520 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 TSEN54Q7Z6J9 526 aaKnown RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 MDP1Q86V88 176 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 OR51F2Q8NH61 342 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 C22orf15Q8WYQ4 148 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 SLC38A4Q969I6 547 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 DHRS1Q96LJ7 313 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 SLC6A7Q99884 636 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 RBM4Q9BWF3 364 aaKnown RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 SF3B5Q9BWJ5 86 aaKnown RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 MRPL37Q9BZE1 423 aaKnown RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 NMNAT1Q9HAN9 279 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 NOX3Q9HBY0 568 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 KRCC1Q9NPI7 259 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-201ENST00000242776 RHCGQ9UBD6 479 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 REV1Q9UBZ9 1251 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 TMCC3Q9ULS5 477 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 CMAHPQ9Y471 501 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 WNK2Q9Y3S1 2297 aa11.86□□□□□ -0.51
DDX39A-201ENST00000242776 A0A087WUJ7 227 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 A0A1W2PRQ8 180 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 TNFRSF11BO00300 401 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 FFAR1O14842 300 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 E2F6O75461 281 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 GAAP10253 952 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 CBR1P16152 277 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 RBM34P42696 430 aaKnown RBP11.85□□□□□ -0.51
DDX39A-201ENST00000242776 ARHGDIAP52565 204 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 CLDN17P56750 224 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 SCGB2A2Q13296 93 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 DGCR6Q14129 220 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 TTC33Q6PID6 262 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-201ENST00000242776 C5orf46Q6UWT4 87 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 RRM2BQ7LG56 351 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 EPHX4Q8IUS5 362 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 YIPF5Q969M3 257 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 SLC25A36Q96CQ1 311 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 ZNF837Q96EG3 531 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-201ENST00000242776 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 EPYCQ99645 322 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 DCLRE1BQ9H816 532 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 ZNF275Q9NSD4 429 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-201ENST00000242776 SAMHD1Q9Y3Z3 626 aaKnown RBP11.85□□□□□ -0.51
DDX39A-201ENST00000242776 ARHGAP32A7KAX9 2087 aa11.85□□□□□ -0.51
DDX39A-201ENST00000242776 H3BNX3 289 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 M0R233 179 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 TMPRSS2O15393 492 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 BAG2O95816 211 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 RCN1Q15293 331 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 AVPI1Q5T686 147 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 C1QTNF12Q5T7M4 302 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 TSPYL5Q86VY4 417 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-201ENST00000242776 LRP11Q86VZ4 500 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 PQLC1Q8N2U9 271 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 LINC00471Q8N535 108 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 STK35Q8TDR2 534 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 ACOT11Q8WXI4 607 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-201ENST00000242776 LRTOMTQ8WZ04 291 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 TMEM43Q9BTV4 400 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 ESM1Q9NQ30 184 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 FBXO9Q9UK97 447 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-201ENST00000242776 PPIAL4AQ9Y536 164 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 LYVE1Q9Y5Y7 322 aa11.84□□□□□ -0.51
DDX39A-201ENST00000242776 A8MVM7 634 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 PNPP00491 289 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 THY1P04216 161 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 NAT2P11245 290 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 P2RY4P51582 365 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 PIGFQ07326 219 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 CEACAM16Q2WEN9 425 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 C3orf36Q3SXR2 165 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF730Q6ZMV8 503 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 NKAIN4Q8IVV8 208 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 OR52J3Q8NH60 311 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 MAGEE2Q8TD90 523 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-201ENST00000242776 TMEM239Q8WW34 195 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 CENPNQ96H22 339 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-201ENST00000242776 BOD1Q96IK1 185 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 DUX5Q96PT3 197 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 C1QTNF5Q9BXJ0 243 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 SLC19A3Q9BZV2 496 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 MAN2C1Q9NTJ4 1040 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 MYEF2Q9P2K5 600 aaKnown RBP11.83□□□□□ -0.52
DDX39A-201ENST00000242776 SEC14L4Q9UDX3 406 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 HTR3EA5X5Y0 456 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 SYNGR3O43761 229 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 CDC14BO60729 498 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 CCNB2O95067 398 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 LYPD3O95274 346 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 HLA-HP01893 362 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 CD79AP11912 226 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 IFNGR2P38484 337 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 HMGA2P52926 109 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 MVKQ03426 396 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 RIPK1Q13546 671 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms