RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 NPIPA2E9PIF3 369 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 NPIPA3F8WFD2 350 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 PHYHO14832 338 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 UPK3AO75631 287 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 HRGP04196 525 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 SPARCP09486 303 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 RPS19P39019 145 aaKnown RBP13.53□□□□□ -0.24
HDHD3-201ENST00000238379 PSMB10P40306 273 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 CLDN18P56856 261 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 EGR3Q06889 387 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 CDK5R1Q15078 307 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 PCK2Q16822 640 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 TEX30Q5JUR7 227 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 RPL22L1Q6P5R6 122 aaKnown RBP13.53□□□□□ -0.24
HDHD3-201ENST00000238379 LRFN4Q6PJG9 635 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 SLC25A47Q6Q0C1 308 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
HDHD3-201ENST00000238379 GLB1L2Q8IW92 636 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 FAM109AQ8N4B1 249 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 FNDC8Q8TC99 324 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 RPS4Y2Q8TD47 263 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 NSMAFQ92636 917 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 GHSRQ92847 366 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 SMIM19Q96E16 107 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 KCTD7Q96MP8 289 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 OR2M2Q96R28 347 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 CDADC1Q9BWV3 514 aa13.53□□□□□ -0.24
HDHD3-201ENST00000238379 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
HDHD3-201ENST00000238379 ZNF716A6NP11 495 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 KRT8P05787 483 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 INHBBP09529 407 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 TACSTD2P09758 323 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF708P17019 499 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 TGM4P49221 684 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 SLC10A1Q14973 349 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 LIPNQ5VXI9 398 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 ABLIM2Q6H8Q1 611 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 SLC18B1Q6NT16 456 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 LINC00299Q6ZSB3 139 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 TMEM123Q8N131 208 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 ASB17Q8WXJ9 295 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 ROBO4Q8WZ75 1007 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 MCHR2Q969V1 340 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 CPNE4Q96A23 557 aaPredicted RBP13.52□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF845Q96IR2 970 aaPredicted RBP13.52□□□□□ -0.25
HDHD3-201ENST00000238379 TIGARQ9NQ88 270 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 SLCO1C1Q9NYB5 712 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 GSTK1Q9Y2Q3 226 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 ASPMQ8IZT6 3477 aa13.52□□□□□ -0.25
HDHD3-201ENST00000238379 CD8B2A6NJW9 211 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 DVL2O14641 736 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 SC5DO75845 299 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 RGS9O75916 674 aaPredicted RBP13.51□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF432O94892 652 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 IL1AP01583 271 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 ITGB2P05107 769 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 CD1AP06126 327 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 CD8BP10966 210 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 LAP3P28838 519 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 GDI2P50395 445 aaKnown RBP13.51□□□□□ -0.25
HDHD3-201ENST00000238379 ROR2Q01974 943 aaKnown RBP13.51□□□□□ -0.25
HDHD3-201ENST00000238379 ROM1Q03395 351 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 TRAM1Q15629 374 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 BCL2A1Q16548 175 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 PDSS1Q5T2R2 415 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 MCFD2Q8NI22 146 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 ABHD4Q8TB40 342 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 OR8B4Q96RC9 309 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 SMAD5Q99717 465 aaKnown RBP13.51□□□□□ -0.25
HDHD3-201ENST00000238379 TTYH2Q9BSA4 534 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 ABHD6Q9BV23 337 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 NXF2Q9GZY0 626 aaKnown RBP13.51□□□□□ -0.25
HDHD3-201ENST00000238379 GALNT8Q9NY28 637 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 IKZF2Q9UKS7 526 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 FLVCR1Q9Y5Y0 555 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 A3GALT2U3KPV4 340 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 DCHS1Q96JQ0 3298 aa13.51□□□□□ -0.25
HDHD3-201ENST00000238379 TRBV2A0A0J9YWF9 115 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ACOT7O00154 380 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 CDRT1O95170 752 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 QDPRP09417 244 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF823P16415 610 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 EDNRAP25101 427 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 NANOS3P60323 173 aaKnown RBP13.5□□□□□ -0.25
HDHD3-201ENST00000238379 MOGQ16653 247 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF404Q494X3 552 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 FAM220AQ7Z4H9 259 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 MS4A15Q8N5U1 240 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 YIPF7Q8N8F6 280 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 C11orf40Q8WZ69 217 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 HSD17B8Q92506 261 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ABTB1Q969K4 478 aaPredicted RBP13.5□□□□□ -0.25
HDHD3-201ENST00000238379 TMEM54Q969K7 222 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 MED18Q9BUE0 208 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 BARHL1Q9BZE3 327 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ZDHHC11Q9H8X9 412 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms