RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 GSG1Q2KHT4 349 aa12.54□□□□□ -0.4
NFKB1-201ENST00000226574 SVBPQ8N300 66 aa12.54□□□□□ -0.4
NFKB1-201ENST00000226574 C19orf47Q8N9M1 422 aaKnown RBP12.54□□□□□ -0.4
NFKB1-201ENST00000226574 MR1Q95460 341 aa12.54□□□□□ -0.4
NFKB1-201ENST00000226574 TSLPQ969D9 159 aa12.54□□□□□ -0.4
NFKB1-201ENST00000226574 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 GGT3PA6NGU5 568 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 IMPA2O14732 288 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 RAD51DO75771 328 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 CNOT4O95628 575 aaKnown RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 EPHA1P21709 976 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 BIDP55957 195 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 PMPCAQ10713 525 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 SLC16A9Q7RTY1 509 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 HSD17B11Q8NBQ5 300 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 OR2G2Q8NGZ5 317 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 SDHCQ99643 169 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 SLCO1C1Q9NYB5 712 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 PUS1Q9Y606 427 aaKnown RBP eCLIP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 PRAMEF27A3QJZ7 478 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 DBHP09172 617 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 GIPP09681 153 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 BLVRBP30043 206 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 CSNK1EP49674 416 aaKnown RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 CYCSP99999 105 aaKnown RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 ACY1Q03154 408 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 NR0B2Q15466 257 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 TMEM176BQ3YBM2 270 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 CLVS2Q5SYC1 327 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 TMEM81Q6P7N7 255 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 SFTPA2Q8IWL1 248 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 GABRG1Q8N1C3 465 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 OR4D6Q8NGJ1 314 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 POMT2Q9UKY4 750 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 TMED7-TICAM2A0A0A6YYA0 188 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 KIR2DS5A0A0G2JLQ3 304 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 A0A0G2JNG1 304 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 LOC100289279A0A1B0GTE1 492 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 LEUTXA8MZ59 168 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 KIR2DS3K7RE56 304 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 DNAJB6O75190 326 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 CT62P0C5K7 136 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 KIR2DS5Q14953 304 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 OR52W1Q6IF63 320 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 TCEAL6Q6IPX3 200 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 ADAM5Q6NVV9 412 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 PAPD4Q6PIY7 484 aaKnown RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 RNF165Q6ZSG1 346 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 FNDC9Q8TBE3 224 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 RAB3CQ96E17 227 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 LRRC3BQ96PB8 259 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 PELOQ9BRX2 385 aaKnown RBP12.53□□□□□ -0.4
NFKB1-201ENST00000226574 KCNJ16Q9NPI9 418 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 DKKL1Q9UK85 242 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 TMED7Q9Y3B3 224 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 PCDHGA1Q9Y5H4 931 aa12.53□□□□□ -0.4
NFKB1-201ENST00000226574 SULT2B1O00204 365 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 HSPB6O14558 160 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 MTRF1O75570 445 aaKnown RBP12.52□□□□□ -0.4
NFKB1-201ENST00000226574 WDPCPO95876 746 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 KLK3P07288 261 aaPredicted RBP12.52□□□□□ -0.4
NFKB1-201ENST00000226574 MMP15P51511 669 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 SGPP2Q8IWX5 399 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 SGCZQ96LD1 299 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 LINC00615Q96LM1 132 aaPredicted RBP12.52□□□□□ -0.4
NFKB1-201ENST00000226574 A0A0D9SG52 128 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 FAM221BA6H8Z2 402 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 D6RAR5 112 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 PRAMEF26H0Y7S4 382 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 AKR7A3O95154 331 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 NXPH3O95157 252 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 SRYQ05066 204 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 PEA15Q15121 130 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 LILRA6Q6PI73 481 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 VN1R4Q7Z5H5 301 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 SUMF1Q8NBK3 374 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 CMBLQ96DG6 245 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 ARHGDIGQ99819 225 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 CRB3Q9BUF7 120 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 TMEM59Q9BXS4 323 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 FKRPQ9H9S5 495 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 CUTCQ9NTM9 273 aa12.52□□□□□ -0.4
NFKB1-201ENST00000226574 TDRD6O60522 2096 aaKnown RBP12.52□□□□□ -0.4
NFKB1-201ENST00000226574 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 EFCAB7A8K855 629 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 GALR3O60755 368 aaPredicted RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 NSA2O95478 260 aaKnown RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 EEF1A2Q05639 463 aaKnown RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 CCINQ13939 588 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 PPA1Q15181 289 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 LGALSLQ3ZCW2 172 aaPredicted RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 PLEKHN1Q494U1 663 aaPredicted RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 CBLN3Q6UW01 205 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 SULF2Q8IWU5 870 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 C9orf62Q8N4C0 152 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms