RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 HHIPL1Q96JK4 782 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 SLC6A7Q99884 636 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 SEC11CQ9BY50 192 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 RPS10P5Q9NQ39 176 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 TTC28Q96AY4 2481 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 SNRNP200O75643 2136 aaKnown RBP12.91□□□□□ -0.34
SHPK-201ENST00000225519 C1QTNF3-AMACRE9PGA6 284 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 TSFMP43897 325 aaKnown RBP12.91□□□□□ -0.34
SHPK-201ENST00000225519 PPP1R1AQ13522 171 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 ZNHIT3Q15649 155 aaPredicted RBP12.91□□□□□ -0.34
SHPK-201ENST00000225519 NNATQ16517 81 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 SLC43A2Q8N370 569 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 TMEM229BQ8NBD8 167 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 SEH1LQ96EE3 360 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 CARHSP1Q9Y2V2 147 aaKnown RBP12.91□□□□□ -0.34
SHPK-201ENST00000225519 TMEM212A6NML5 194 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 P2RX6O15547 441 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 F13BP05160 661 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 CDKN2AP42771 156 aaKnown RBP12.91□□□□□ -0.34
SHPK-201ENST00000225519 LSSP48449 732 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 PJVKQ0ZLH3 352 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 ITPRIPL2Q3MIP1 535 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 RHOFQ9HBH0 211 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 MMP26Q9NRE1 261 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.91□□□□□ -0.34
SHPK-201ENST00000225519 EPHA6Q9UF33 1036 aa12.91□□□□□ -0.34
SHPK-201ENST00000225519 TMEM235A6NFC5 223 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 EIF1AYO14602 144 aaKnown RBP12.9□□□□□ -0.34
SHPK-201ENST00000225519 YKT6O15498 198 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 AK1P00568 194 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 CPT2P23786 658 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 S100PP25815 95 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 EIF1AXP47813 144 aaKnown RBP12.9□□□□□ -0.34
SHPK-201ENST00000225519 ELAVL3Q14576 367 aaKnown RBP12.9□□□□□ -0.34
SHPK-201ENST00000225519 DHCR24Q15392 516 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 OR10K2Q6IF99 312 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 PHOSPHO1Q8TCT1 267 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 SMARCD2Q92925 531 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 DNAJA3Q96EY1 480 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 SEMA6CQ9H3T2 930 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 C1orf198Q9H425 327 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 DZANK1Q9NVP4 752 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 CPED1A4D0V7 1026 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 BRINP1O60477 761 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 ICOSLGO75144 302 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 DNAJB6O75190 326 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 UPK3AO75631 287 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 PSMB6P28072 239 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 HAAOP46952 286 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 RUNX2Q13950 521 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 CEBPEQ15744 281 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 TCEAL5Q5H9L2 206 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 ADAMTSL4Q6UY14 1074 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 LYG2Q86SG7 212 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 SUSD6Q92537 303 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 NXPE3Q969Y0 559 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 PIK3IP1Q96FE7 263 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 FOXN4Q96NZ1 517 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 CST11Q9H112 138 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 CGGBP1Q9UFW8 167 aaPredicted RBP12.9□□□□□ -0.34
SHPK-201ENST00000225519 CACNA1IQ9P0X4 2223 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 EDDM13A0A1B0GTR0 161 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 CD2P06729 351 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 ZNF10P21506 573 aaPredicted RBP12.9□□□□□ -0.34
SHPK-201ENST00000225519 RPS4Y1P22090 263 aaKnown RBP12.9□□□□□ -0.34
SHPK-201ENST00000225519 PGDP52209 483 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 ELOCQ15369 112 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 GLYATL3Q5SZD4 288 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 LRRC69Q6ZNQ3 347 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 ZNF550Q7Z398 422 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 NUBPLQ8TB37 319 aa12.9□□□□□ -0.34
SHPK-201ENST00000225519 A0A1B0GTI1 187 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 CXCL14O95715 111 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 ADH5P11766 374 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 PAPD4Q6PIY7 484 aaKnown RBP12.89□□□□□ -0.35
SHPK-201ENST00000225519 ZNF813Q6ZN06 617 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 ACBD4Q8NC06 268 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 COX14Q96I36 57 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 PRRT1Q99946 306 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 PHPT1Q9NRX4 125 aaPredicted RBP12.89□□□□□ -0.35
SHPK-201ENST00000225519 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.89□□□□□ -0.35
SHPK-201ENST00000225519 DHDHQ9UQ10 334 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 TRBV5-5A0A0J9YX44 114 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 URADA6NGE7 173 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 SLC17A2O00624 439 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 OR6A2O95222 327 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 EFEMP2O95967 443 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 ABCD3P28288 659 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 CD80P33681 288 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 RASGEF1BQ0VAM2 473 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 HNRNPA1L2Q32P51 320 aaKnown RBP12.89□□□□□ -0.35
SHPK-201ENST00000225519 C5orf46Q6UWT4 87 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 PARGQ86W56 976 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 GATSQ8NAP1 163 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 NRIP2Q9BQI9 281 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 TCEAL7Q9BRU2 100 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 GRHPRQ9UBQ7 328 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 SLC27A6Q9Y2P4 619 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms