RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 PLEKHF2Q9H8W4 249 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 MMP17Q9ULZ9 603 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 TUSC2O75896 110 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 B3GALT4O96024 378 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 BAXQ07812 192 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 SYT13Q7L8C5 426 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 RBM45Q8IUH3 476 aaKnown RBP12.44□□□□□ -0.42
SF3A1-201ENST00000215793 KDM8Q8N371 416 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 PIGLQ9Y2B2 252 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 UBR2Q8IWV8 1755 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 SGCEO43556 437 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 ZDHHC11BP0C7U3 371 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CT45A6P0DMU7 189 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CT45A5P0DMU8 189 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CT45A7P0DMV0 189 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CT45A8P0DMV1 189 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CT45A9P0DMV2 189 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 NME2P22392 152 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CCR6P51684 374 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 OR1D5P58170 312 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 TBC1D28Q2M2D7 210 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CT45A2Q5DJT8 189 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CT45A1Q5HYN5 189 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 ZNF620Q6ZNG0 422 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 SEMA6DQ8NFY4 1073 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 PFN4Q8NHR9 129 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CT45A3Q8NHU0 189 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 CDCA4Q9BXL8 241 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 GFOD1Q9NXC2 390 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 K7ESM1 405 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 TXNL1O43396 289 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 IGLV3-25P01717 112 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 RBMXL3Q8N7X1 1067 aaKnown RBP12.44□□□□□ -0.42
SF3A1-201ENST00000215793 ST7LQ8TDW4 575 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 UBE2FQ969M7 185 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 MOB1AQ9H8S9 216 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 ZMAT3Q9HA38 289 aaKnown RBP12.44□□□□□ -0.42
SF3A1-201ENST00000215793 PDFQ9HBH1 243 aa12.44□□□□□ -0.42
SF3A1-201ENST00000215793 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 BTBD17A6NE02 478 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 M0R082 166 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 RFX2P48378 723 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 MRPL19P49406 292 aaKnown RBP12.43□□□□□ -0.42
SF3A1-201ENST00000215793 DUSP8Q13202 625 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 TMEM81Q6P7N7 255 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 PXT1Q8NFP0 134 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 DVL3Q92997 716 aaPredicted RBP12.43□□□□□ -0.42
SF3A1-201ENST00000215793 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 C19orf43Q9BQ61 176 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 NIPSNAP3BQ9BS92 247 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 GABARAPL1Q9H0R8 117 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 HEYLQ9NQ87 328 aaPredicted RBP12.43□□□□□ -0.42
SF3A1-201ENST00000215793 TEX51A0A1B0GUA7 166 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 NKX6-3A6NJ46 265 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 LRRC30A6NM36 301 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 ZNF891A8MT65 544 aaPredicted RBP12.43□□□□□ -0.42
SF3A1-201ENST00000215793 AKR7A3O95154 331 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 SSTP61278 116 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 TMEM200AQ86VY9 491 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 WWTR1Q9GZV5 400 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 LALBAP00709 142 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 PMP2P02689 132 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 CTXN2P0C2S0 81 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 AADACP22760 399 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 SLC19A1P41440 591 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 PPICP45877 212 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 CLINT1Q14677 625 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 GLYR1Q49A26 553 aaPredicted RBP12.43□□□□□ -0.42
SF3A1-201ENST00000215793 TMEM41BQ5BJD5 291 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 PARM1Q6UWI2 310 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 CTRCQ99895 268 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 SLC6A17Q9H1V8 727 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 CDCP1Q9H5V8 836 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 TOPAZ1Q8N9V7 1692 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 ENSAO43768 121 aaKnown RBP12.43□□□□□ -0.42
SF3A1-201ENST00000215793 IGLV3-27P01718 113 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 ANKRD33Q7Z3H0 272 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 DPPA2Q7Z7J5 298 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 OR2L13Q8N349 312 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 SEC22CQ9BRL7 303 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 GABARAPL3Q9BY60 117 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 ARV1Q9H2C2 271 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 BCL2L10Q9HD36 194 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 CHST11Q9NPF2 352 aa12.43□□□□□ -0.42
SF3A1-201ENST00000215793 EDDM3BP56851 147 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 DUS3LQ96G46 650 aaKnown RBP12.42□□□□□ -0.42
SF3A1-201ENST00000215793 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 TXN2Q99757 166 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 SEMA4CQ9C0C4 833 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 ISYNA1Q9NPH2 558 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 NUP98P52948 1817 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 A0A1W2PPH5 198 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 KLK8O60259 260 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 SDHAP31040 664 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 IRS1P35568 1242 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 NPY4RP50391 375 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 HSF1Q00613 529 aa12.42□□□□□ -0.42
SF3A1-201ENST00000215793 MRPL58Q14197 206 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms