RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tmem222Q8BVA2 208 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ssuh2Q8C3L1 340 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr97Q8VFE1 310 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 D730048I06RikQ9CQB8 106 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Rcc1lQ9CYF5 461 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cdc40Q9DC48 579 aaKnown RBP14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Scamp2Q9ERN0 329 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Nox4Q9JHI8 578 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Rnf32Q9JIT1 368 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ighv1-42A0A0A6YY38 117 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Mettl7a3G3X9G9 244 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr1222Q7TR02 311 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r17Q8R2D8 303 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cbx7Q8VDS3 158 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr676Q8VGZ9 317 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Arfgap1Q9EPJ9 414 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Acox3Q9EPL9 700 aa14.38□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr1193A2AV13 318 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Nfatc1O88942 717 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Elk1P41969 429 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr3Q60879 313 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tssk1bQ61241 365 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Coq9Q8K1Z0 313 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Plxdc2Q9DC11 530 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cpn1Q9JJN5 457 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cops3O88543 423 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cfl1P18760 166 aaKnown RBP14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Mfap2P55002 183 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ctbp2P56546 445 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Ctf2P83714 204 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Taar6Q5QD13 345 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr774Q7TRI5 312 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr164Q8VF87 315 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr1261Q8VFB0 306 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr283Q8VGU2 309 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Thumpd1Q99J36 350 aaKnown RBP14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gorasp2Q99JX3 451 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 PrnA0A075B668 197 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gm21854A0A087WNM4 232 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Fam90a1aA2A4E2 429 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gm13078A2AGW8 474 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Smpd5D6MZJ6 483 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gm6401L7N2C0 213 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Prss12O08762 761 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Spsb2O88838 264 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Actc1P68033 377 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Acta1P68134 377 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Nr4a2Q06219 598 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 EgflamQ4VBE4 1017 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Sp9Q64HY3 484 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Nudt15Q8BG93 170 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 RhbgQ8BUX5 455 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tns4Q8BZ33 696 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Rdh10Q8VCH7 341 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 PrndQ9QUG3 179 aa14.37□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gm4177D3YTX5 305 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r127K7N6J5 305 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r142K7N6U0 305 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r94K7N6X3 305 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r115K7N6Y3 295 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r159K7N701 305 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Npr2Q6VVW5 1047 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr1161Q7TR29 321 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Znf8Q8BGV5 572 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tmem251Q8BH26 163 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Gm9999Q8C5Y2 53 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Peli1Q8C669 418 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r217Q8R270 298 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cd209dQ91ZW8 237 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 PsphQ99LS3 225 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Snapc3Q9D2C9 407 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Alg2Q9DBE8 415 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Wwtr1Q9EPK5 395 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Nkain4Q9JMG4 208 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Phf1Q9Z1B8 559 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Zyg11aA2BFL2 627 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Scgb2b3D2XZ38 112 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn1r58G3X9U3 310 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Pip5k1cO70161 661 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Pcbp4P57724 403 aaKnown RBP14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Cnn2Q08093 305 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Zfp748Q7TPL6 888 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 P4htmQ8BG58 503 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Tgm4Q8BZH1 670 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Neurl3Q8CJC5 254 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr922Q8VG50 311 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Prss42Q8VIF2 335 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 BmfQ91ZE9 185 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Dusp22Q99N11 184 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Rprd1bQ9CSU0 326 aaKnown RBP14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Q9DAS2 200 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 SrfQ9JM73 504 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Vmn2r16E9Q025 850 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Wdr75Q3U821 830 aaKnown RBP14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Kcnc3Q63959 769 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Olfr270Q7TS19 314 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Prkd2Q8BZ03 875 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Fbxw19Q8C2W8 466 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Sdf2Q9DCT5 211 aa14.36□□□□□ -0.11
Trim39-203ENSMUST00000113706 Sh3bgrlQ9JJU8 114 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms