RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Pxdc1Q8JZU6 231 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr165Q8VFA2 313 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr131Q8VGC8 314 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr870Q8VGG4 311 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr531Q8VGL2 304 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr644Q8VH21 314 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Dnttip1Q99LB0 328 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gabra4Q9D6F4 552 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Mrps15Q9DC71 258 aaKnown RBP11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 Yipf7Q9JIM5 254 aa11.79□□□□□ -0.52
Nup88-203ENSMUST00000108531 PcntP48725 2898 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm7697A0A0J9YUH2 350 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm9495A0A0J9YUZ3 350 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm5788A0A1Y7VK80 144 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr115B2RTB9 312 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm5286E0CXI6 357 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Prps1l3G3UXL2 318 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gm20683H3BKJ1 410 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr889L7N1Y6 314 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Irs3O54718 495 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Sod2P09671 222 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Crisp2P16563 243 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 PrkcaP20444 672 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Pou3f1P21952 449 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 EpxP49290 716 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tas2r123P59528 333 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Tgif1P70284 272 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Klhdc2Q4G5Y1 406 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Epha1Q60750 977 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Kcnc3Q63959 769 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Jazf1Q80ZQ5 243 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Lhfpl6Q8BM86 200 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Fgd2Q8BY35 655 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Stbd1Q8C7E7 338 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Mmp21Q8K3F2 568 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr734Q8VFT4 313 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Mrpl14Q9D1I6 145 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Slc6a19Q9D687 634 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cers4Q9D6J1 393 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Nmrk2Q9D7C9 195 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Prps1Q9D7G0 318 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Bex2Q9WTZ8 129 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Usp36B1AQJ2 1098 aaKnown RBP11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Clip3B9EHT4 547 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr741L7N1Y5 311 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cyp4a10O88833 509 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 P01661 131 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 P01662 111 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 P01663 111 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cox4i1P19783 169 aaKnown RBP11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Sult2a2P50236 285 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rap2bP61226 183 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ppp1caP62137 330 aaKnown RBP11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Art5P70352 309 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Snai2P97469 269 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cachd1Q6PDJ1 1288 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Rcor3Q6PGA0 451 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Apoa5Q8C7G5 368 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Hist1h2ahQ8CGP6 128 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Dnajc22Q8CHS2 339 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Olfr1143Q8VEU8 314 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Cdc42ep1Q91W92 409 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Chrm5Q920H4 532 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Zfp810Q99K45 461 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Gpn3Q9D3W4 284 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 4933402D24RikQ9D4D3 167 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Psma6Q9QUM9 246 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Efemp2Q9WVJ9 443 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ilf3Q9Z1X4 898 aaKnown RBP11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Ppp1r17Q9Z2E4 159 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Kcnj16Q9Z307 419 aa11.78□□□□□ -0.52
Nup88-203ENSMUST00000108531 Zfp300A2AE21 645 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r137D3YTY1 307 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 SelenonD3Z2R5 557 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r143E9PUW9 307 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r157E9Q069 297 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r139E9Q8L6 297 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Omt2aF6ZJR3 104 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r112G3UY48 297 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r135K9J7G0 307 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r125L7N227 307 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r116L7N2A6 307 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 St8sia2O35696 375 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Hnrnpa2b1O88569 353 aaKnown RBP11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ighg1P01869 393 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Zp3P10761 424 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 FaslgP41047 279 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tcf7Q00417 419 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Cd34Q64314 382 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Itfg2Q91WI7 443 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Q99K99 313 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Uqcrc1Q9CZ13 480 aaKnown RBP11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Ethe1Q9DCM0 254 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Vmn1r100Q9EPS5 307 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1130A0A1L1SQT2 314 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 4930563M21RikA0A1L1SUT5 578 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Slc25a43A2A3V2 341 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Tmsb15aA2AEH9 79 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1129A2AV41 314 aa11.77□□□□□ -0.53
Nup88-203ENSMUST00000108531 Olfr1055A2AVX9 346 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms