RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Olfr922Q8VG50 311 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mrgpra3Q91WW3 302 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fastkd2Q922E6 689 aaKnown RBP7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Arl4dQ99PE9 201 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Atp5f1Q9CQQ7 256 aaKnown RBP7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ifitm3Q9CQW9 137 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Steap1Q9CWR7 339 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tstd3Q9D0B5 157 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Dusp3Q9D7X3 185 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Timm50Q9D880 353 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Spint2Q9WU03 252 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp735B1ARH2 734 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mrap2D3Z1Q2 207 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn2r106E9PY92 862 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm43517E9PYS1 339 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Obox6G3X9U1 347 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm21800J3QMJ9 180 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 P06321 130 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc2a1P17809 492 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 GifP52787 417 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Abcd3P55096 659 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tcl1aP56280 116 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 InipQ3TXT3 104 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gramd2aQ3V3G7 320 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 CalcrQ60755 533 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fam181bQ80VF6 417 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Prap1Q80XD8 149 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 F830045P16RikQ8BJ95 487 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Lurap1lQ8K2P1 221 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr791Q8VGJ0 312 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rab40bQ8VHP8 278 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ces2cQ91WG0 561 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ddah2Q99LD8 285 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mgst3Q9CPU4 153 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gid4Q9CPY6 217 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Spcs2Q9CYN2 226 aaKnown RBP7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rnase10Q9D5A9 208 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Reg4Q9D8G5 157 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc48a1Q9D8M3 146 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tspan32Q9JHH2 256 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Avpr1bQ9WU02 421 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vps13cQ8BX70 3748 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ighv1-78A0A0G2JGN3 117 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ifit3bE9PV48 403 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm8660K7N6J2 305 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ubl4aP21126 157 aaKnown RBP7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cst3P21460 140 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Aqp8P56404 261 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rps4xP62702 263 aaKnown RBP7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cpeb1P70166 561 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Nxpe2Q3U095 558 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Nlrc3Q5DU56 1064 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr9Q60885 312 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cd47Q61735 303 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Abhd17bQ7M759 288 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc35f2Q7TML3 375 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Baiap2Q8BKX1 535 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Nrn1lQ8C4W3 162 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Padi6Q8K3V4 682 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr444Q8VFS6 310 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr447Q8VGP6 310 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pot1Q91WC1 640 aaKnown RBP7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 AldobQ91Y97 364 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Sectm1aQ921W8 192 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmem179bQ9CY24 219 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Efcab11Q9D0E5 162 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Syt13Q9EQT6 426 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Isyna1Q9JHU9 557 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 RangrfQ9JIB0 185 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmem176bQ9R1Q6 263 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Nfkb2Q9WTK5 899 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Spg11Q3UHA3 2430 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ighv1-54A0A075B5W5 117 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ppp1r3dA2AJW4 279 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1247A2AT78 314 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1145A2AVC7 325 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Maml2F6U238 1170 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc1a3P56564 543 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Taar8cQ5QD05 344 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fzd8Q61091 685 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Npepl1Q6NSR8 524 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Arhgef4Q7TNR9 484 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pum1Q80U78 1189 aaKnown RBP7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 TecrlQ8BFZ1 361 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 P4htmQ8BG58 503 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mboat1Q8BH98 492 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 LsampQ8BLK3 341 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Smim37Q8BT35 56 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Prkd2Q8BZ03 875 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Flywch1Q8CI03 673 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Angptl7Q8R1Q3 337 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ugt2b37Q8VCN3 530 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1284Q8VF29 311 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr378Q8VGT2 314 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lactb2Q99KR3 288 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cdca3Q99M54 266 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tnk1Q99ML2 666 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Txndc17Q9CQM5 123 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 MmachcQ9CZD0 279 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Trem1Q9JKE2 230 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms