RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 CtgfP29268 348 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 PvalbP32848 110 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tnfrsf4P47741 272 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tgif1P70284 272 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Epha4Q03137 986 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 MamstrQ0ZCJ7 421 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Akt2Q60823 481 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Drd1Q61616 446 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Kcnc3Q63959 769 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 N6amt1Q6SKR2 214 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Carns1Q6ZPS2 827 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 H2-M10.5Q85ZW7 330 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r228Q8R2A7 333 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr1143Q8VEU8 314 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Scgb3a1Q920D7 104 aa17.08■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 A0A1L1STL9 112 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Zfp735B1ARH2 734 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr115B2RTB9 312 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Wscd2D4PHA7 571 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r91E9PZR7 307 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn2r41E9Q5C7 852 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn2r48E9Q5D8 855 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn2r40F6W043 852 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn2r36K7N741 852 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Hsd17b12O70503 312 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Prkar1bP12849 381 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Rag2P21784 527 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 PtgirP43252 415 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ndufb6Q3UIU2 128 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Fam71f1Q3UZD7 341 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Slc16a11Q5NC32 447 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tnfrsf8Q60846 498 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Epha6Q62413 1035 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tmed3Q78IS1 221 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Prss34Q80UR4 318 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Stbd1Q8C7E7 338 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Rab43Q8CG50 210 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr1048Q8VGS2 320 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Wdsub1Q9D0I6 474 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Spaca7Q9D2S4 182 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Phf1Q9Z1B8 559 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 B4galt2Q9Z2Y2 369 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Kcnj16Q9Z307 419 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r137D3YTY1 307 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Btbd8D3YUB6 377 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r143E9PUW9 307 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r157E9Q069 297 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r139E9Q8L6 297 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r112G3UY48 297 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr152G3X9L8 316 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r135K9J7G0 307 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr1221L7MU53 311 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r125L7N227 307 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r116L7N2A6 307 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tmem14aP56983 99 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 FcrlbQ5DRQ8 427 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Eif1aQ60872 144 aaKnown RBP17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Cd55Q61475 390 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Prm3Q62100 101 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Chst14Q80V53 376 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Otop1Q80VM9 600 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Hapln3Q80WM5 359 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Defb22Q8BVC1 179 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Rfwd3Q8CIK8 774 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 LiphQ8CIV3 451 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Slc38a1Q8K2P7 485 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Rfc3Q8R323 356 aaKnown RBP17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tspan10Q8VCF5 331 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r100Q9EPS5 307 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Yipf7Q9JIM5 254 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Gm17087V9GXQ2 156 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Exph5Q0VAV2 1960 aa17.07■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 P01654 111 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 P01656 111 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 P03977 111 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 RrasP10833 218 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Pou3f1P21952 449 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Pdp1Q3UV70 538 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Nufip2Q5F2E7 692 aaKnown RBP17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 PcnpQ6P8I4 178 aaKnown RBP17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Shc4Q6S5L9 626 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 GgnQ80WJ1 673 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Jazf1Q80ZQ5 243 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 CyrenQ8BHZ5 157 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr1378Q8VGH0 315 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tmem218Q9CQ44 115 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Slc6a19Q9D687 634 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Gabra4Q9D6F4 552 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Abhd16aQ9Z1Q2 558 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Slc25a25A2ASZ8 469 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Agpat1O35083 285 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn2r89O35199 507 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 CcnkO88874 554 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Rgs16P97428 201 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Prtn3Q61096 254 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 AstlQ6HA09 435 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tha1Q6XPS7 400 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Cpeb4Q7TN98 729 aaKnown RBP17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr47Q8VF18 321 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr131Q8VGC8 314 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms