RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ADGRL4Q9HBW9 690 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 PALMDQ9NP74 551 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 TIGARQ9NQ88 270 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 KLHL1Q9NR64 748 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 PAQR5Q9NXK6 330 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-234ENST00000642041 CRNNQ9UBG3 495 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-234ENST00000642041 NPIPA1Q9UND3 350 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 NCOA6Q14686 2063 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-234ENST00000642041 JMJD1CQ15652 2540 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 TRDV1A0A1B0GX56 115 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 A0A1W2PPW3 197 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 PRSS37A4D1T9 235 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 KLRC4-KLRK1H3BQV0 150 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 GPRIN2O60269 458 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 CFL1P23528 166 aaKnown RBP15.37■□□□□ 0.05
PHGDH-234ENST00000642041 ACVR1BP36896 505 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 CA7P43166 264 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 OC90Q02509 493 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-234ENST00000642041 GLO1Q04760 184 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 OR7A5Q15622 319 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 OR5M10Q6IEU7 315 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 ARSKQ6UWY0 536 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 TMPPEQ6ZT21 453 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 TGIF2LYQ8IUE0 185 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 OR10H4Q8NGA5 316 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 OR4F15Q8NGB8 312 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 KISS1RQ969F8 398 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-234ENST00000642041 REPIN1Q9BWE0 567 aaKnown RBP15.37■□□□□ 0.05
PHGDH-234ENST00000642041 DCSTAMPQ9H295 470 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 MARCH7Q9H992 704 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 LRFN1Q9P244 771 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 CLEC2DQ9UHP7 191 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 KLF13Q9Y2Y9 288 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-234ENST00000642041 CSPG4Q6UVK1 2322 aa15.37■□□□□ 0.05
PHGDH-234ENST00000642041 PNMA8CA0A1B0GUJ8 204 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 OR6C68A6NDL8 312 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 MASP2O00187 686 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 IL1AP01583 271 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 CCL3P10147 92 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF182P17025 639 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-234ENST00000642041 GADD45AP24522 165 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 RUNX1T1Q06455 604 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 EGR3Q06889 387 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 ACKR1Q16570 336 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 THEM4Q5T1C6 240 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 AGAP7PQ5VUJ5 663 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 FCRLBQ6BAA4 426 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 TMEM225Q6GV28 225 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 TUBA3EQ6PEY2 450 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 CD200R1LQ6Q8B3 271 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 GFRALQ6UXV0 394 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 LHFPL3Q86UP9 236 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 UEVLDQ8IX04 471 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 SLC35F2Q8IXU6 374 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF485Q8NCK3 441 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 BBS1Q8NFJ9 593 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF417Q8TAU3 575 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 DYNC2LI1Q8TCX1 351 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 SNX33Q8WV41 574 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 PSMF1Q92530 271 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 KLHL15Q96M94 604 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 KCTD7Q96MP8 289 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 AGAP4Q96P64 663 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 TSPAN32Q96QS1 320 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF587Q96SQ5 575 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-234ENST00000642041 SF3B5Q9BWJ5 86 aaKnown RBP15.36■□□□□ 0.05
PHGDH-234ENST00000642041 HMG20AQ9NP66 347 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 ZFP64Q9NPA5 681 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 ADAM18Q9Y3Q7 739 aa15.36■□□□□ 0.05
PHGDH-234ENST00000642041 ZC3H12DA2A288 527 aaKnown RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 LRRN3E7EW58 273 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 SULT2B1O00204 365 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 ARHGEF9O43307 516 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 PLPP2O43688 288 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 HRGP04196 525 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 F13BP05160 661 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 PCSK6P29122 969 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 CDKN2AP42771 156 aaKnown RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 TGM4P49221 684 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 MYBPHQ13203 477 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 POU4F3Q15319 338 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF829Q3KNS6 432 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 CDONQ4KMG0 1287 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 RPL22L1Q6P5R6 122 aaKnown RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 KCTD18Q6PI47 426 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 ESPNLQ6ZVH7 1005 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 FAM220AQ7Z4H9 259 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 CYB561A3Q8NBI2 242 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF519Q8TB69 540 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 GATAD2BQ8WXI9 593 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 AP3S1Q92572 193 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 DCUN1D5Q9BTE7 237 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 WDR12Q9GZL7 423 aaKnown RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 NAA50Q9GZZ1 169 aaKnown RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 GSX1Q9H4S2 264 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 PLGRKTQ9HBL7 147 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 RPRD1BQ9NQG5 326 aaKnown RBP15.35■□□□□ 0.05
PHGDH-234ENST00000642041 KLHL9Q9P2J3 617 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 KCNG2Q9UJ96 466 aa15.35■□□□□ 0.05
PHGDH-234ENST00000642041 MPDZO75970 2070 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms