RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 FAM166AQ6J272 317 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 OR1J2Q8NGS2 313 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 PHOSPHO2Q8TCD6 241 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 RSC1A1Q92681 617 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 FAM3DQ96BQ1 224 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 C4orf45Q96LM5 186 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 SLC25A21Q9BQT8 299 aaPredicted RBP12.4□□□□□ -0.42
PAX6-280ENST00000640872 SLC17A9Q9BYT1 436 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 POTEKPQ9BYX7 375 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 FAM117AQ9C073 453 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 NDRG3Q9UGV2 375 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 LAMP5Q9UJQ1 280 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 DTX4Q9Y2E6 619 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 C2orf16Q68DN1 1984 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 HEATR5AQ86XA9 2040 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 F5P12259 2224 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 RNF222A6NCQ9 220 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 SLC17A2O00624 439 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 ATG12O94817 140 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 AKR7A3O95154 331 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 RAB3DO95716 219 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 PBX2P40425 430 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 PSMD4P55036 377 aaKnown RBP12.4□□□□□ -0.43
PAX6-280ENST00000640872 B2MP61769 119 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 EGR3Q06889 387 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 RASGEF1BQ0VAM2 473 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 GPM6BQ13491 265 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 NR0B2Q15466 257 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 STK11Q15831 433 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 RAB11BQ15907 218 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 HFEQ30201 348 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 PRRT3Q5FWE3 981 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 ATPAF1Q5TC12 328 aaPredicted RBP12.4□□□□□ -0.43
PAX6-280ENST00000640872 ASPHD2Q6ICH7 369 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 TANGO2Q6ICL3 276 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 C11orf87Q6NUJ2 197 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 UQCC3Q6UW78 93 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 NPSR1Q6W5P4 371 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 GALNT16Q8N428 558 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 TMEM185AQ8NFB2 350 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 SEH1LQ96EE3 360 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 VSTM2LQ96N03 204 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 VRK1Q99986 396 aaPredicted RBP12.4□□□□□ -0.43
PAX6-280ENST00000640872 PIGMQ9H3S5 423 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 SRA1Q9HD15 236 aaKnown RBP12.4□□□□□ -0.43
PAX6-280ENST00000640872 GMEB2Q9UKD1 530 aa12.4□□□□□ -0.43
PAX6-280ENST00000640872 TRBV23OR9-2A0A075B6M9 112 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 SULT1C2O00338 296 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 TXNDC12O95881 172 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 CSTAP01040 98 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 ZNF735P0CB33 412 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 MAOBP27338 520 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 RPS27P42677 84 aaKnown RBP12.39□□□□□ -0.43
PAX6-280ENST00000640872 GRK6P43250 576 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 CTXN1P60606 82 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 ZNF74Q16587 644 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 ARHGAP40Q5TG30 622 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 LPCAT3Q6P1A2 487 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 TMED4Q7Z7H5 227 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 RCBTB1Q8NDN9 531 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 OR6N2Q8NGY6 317 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 LIPHQ8WWY8 451 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 FAM3CQ92520 227 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 RERGQ96A58 199 aaPredicted RBP12.39□□□□□ -0.43
PAX6-280ENST00000640872 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 EDEM2Q9BV94 578 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 WDR76Q9H967 626 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 ACTR10Q9NZ32 417 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 DPP7Q9UHL4 492 aa12.39□□□□□ -0.43
PAX6-280ENST00000640872 SERINC4A6NH21 518 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 TTLL8A6PVC2 850 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 H7C1C5 153 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 M0QYG6 137 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 OR10H2O60403 315 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 FBXO45P0C2W1 286 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 SPTBP11277 2137 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 HOXA1P49639 335 aaPredicted RBP12.38□□□□□ -0.43
PAX6-280ENST00000640872 LCN6P62502 163 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 DHRS2Q13268 280 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 SNTB1Q13884 538 aaKnown RBP12.38□□□□□ -0.43
PAX6-280ENST00000640872 ITPRIPL2Q3MIP1 535 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 PAN3Q58A45 887 aaKnown RBP12.38□□□□□ -0.43
PAX6-280ENST00000640872 ALG10Q5BKT4 473 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 WDR38Q5JTN6 314 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 TMEM205Q6UW68 189 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 ENPP7Q6UWV6 458 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 CCDC36Q8IYA8 594 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 NARS2Q96I59 477 aaKnown RBP12.38□□□□□ -0.43
PAX6-280ENST00000640872 MOGAT1Q96PD6 335 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 MNTQ99583 582 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 TINAGL1Q9GZM7 467 aaPredicted RBP12.38□□□□□ -0.43
PAX6-280ENST00000640872 ATG5Q9H1Y0 275 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 LRIT1Q9P2V4 623 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 FBXO4Q9UKT5 387 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 HSPB2A8KAH6 182 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 HRKO00198 91 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 GPR31O00270 319 aa12.38□□□□□ -0.43
PAX6-280ENST00000640872 KAT7O95251 611 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms