RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-229	ENST00000639809	ATP4B	P51164	291 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	UCP2	P55851	309 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	PCBP3	P57721	371 aa	Known RBP	13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	TTC33	Q6PID6	262 aa	Predicted RBP	13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	LRFN4	Q6PJG9	635 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	WDR88	Q6ZMY6	472 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	HIST3H2A	Q7L7L0	130 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	C1QL2	Q7Z5L3	287 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	PEG10	Q86TG7	708 aa	Known RBP	13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	WDFY1	Q8IWB7	410 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	SLC30A8	Q8IWU4	369 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	C1orf174	Q8IYL3	243 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	C11orf65	Q8NCR3	313 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	HIST1H2AC	Q93077	130 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	TIMD4	Q96H15	378 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	ARHGDIG	Q99819	225 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	FAM107B	Q9H098	131 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	NPHS2	Q9NP85	383 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	TAS2R5	Q9NYW4	299 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	CCDC167	Q9P0B6	97 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	SLAMF8	Q9P0V8	285 aa		13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.49	□□□□□ -0.25
SPIN3-229	ENST00000639809	CLDN25	C9JDP6	229 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	MPZL1	O95297	269 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	BCL10	O95999	233 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	PGA4	P0DJD7	388 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	PGA3	P0DJD8	388 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	ZNF84	P51523	738 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	CCL8	P80075	99 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	HIST3H3	Q16695	136 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	PAGE3	Q5JUK9	113 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	SLC16A14	Q7RTX9	510 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	C10orf111	Q8N326	155 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	CPEB3	Q8NE35	698 aa	Known RBP	13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	FGFBP3	Q8TAT2	258 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	NANP	Q8TBE9	248 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	THOC1	Q96FV9	657 aa	Known RBP	13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	SH3GL3	Q99963	347 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	SIKE1	Q9BRV8	207 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	DECR2	Q9NUI1	292 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	STX18	Q9P2W9	335 aa	Known RBP	13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	TENM1	Q9UKZ4	2725 aa		13.48	□□□□□ -0.25
SPIN3-229	ENST00000639809	TRAPPC13	A5PLN9	417 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	FAM107A	O95990	144 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	CH25H	O95992	272 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	CLPTM1	O96005	669 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	IGHV3-13	P01766	116 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	LCK	P06239	509 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	QDPR	P09417	244 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	ASAH2B	P0C7U1	165 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	PATE4	P0C8F1	98 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	FAM157B	P0CG42	384 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	AQP1	P29972	269 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	APLNR	P35414	380 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	CLRN1	P58418	232 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	CBX1	P83916	185 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	SLC3A1	Q07837	685 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	HFE	Q30201	348 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	ENTPD8	Q5MY95	495 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	CPLX4	Q7Z7G2	160 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	TREML1	Q86YW5	311 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	RBM15B	Q8NDT2	890 aa	Known RBP	13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	OR4K5	Q8NGD3	323 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	ADAMTS16	Q8TE57	1224 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	STON2	Q8WXE9	905 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	RAB1C	Q92928	201 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	ELMOD3	Q96FG2	381 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	ZNF426	Q9BUY5	554 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	TMPRSS13	Q9BYE2	586 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	PCDHAC1	Q9H158	963 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	KCNN2	Q9H2S1	579 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	RABEP2	Q9H5N1	569 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	SAP30L	Q9HAJ7	183 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	TRIM33	Q9UPN9	1127 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809	DYSF	O75923	2080 aa		13.47	□□□□□ -0.25
SPIN3-229	ENST00000639809		M0R3H8	397 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	PLPP2	O43688	288 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	DEAF1	O75398	565 aa	Predicted RBP	13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	IGF2	P01344	180 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	IGHV2-5	P01817	119 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	NR2C1	P13056	603 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	LIPA	P38571	399 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	IDH3A	P50213	366 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	ZNF133	P52736	654 aa	Predicted RBP	13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	DUSP7	Q16829	419 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	ALKBH6	Q3KRA9	238 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	RUNDC3A	Q59EK9	446 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	DCAF12L2	Q5VW00	463 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	PATL1	Q86TB9	770 aa	Known RBP	13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	SMYD1	Q8NB12	490 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	OR6T1	Q8NGN1	323 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	C10orf82	Q8WW14	230 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	RASSF5	Q8WWW0	418 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	CCT8L2	Q96SF2	557 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	SEPHS2	Q99611	448 aa		13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	ELAC2	Q9BQ52	826 aa	Known RBP	13.46	□□□□□ -0.25
SPIN3-229	ENST00000639809	WFDC6	Q9BQY6	131 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms