RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TFP02787 698 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 F13BP05160 661 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 VIMP08670 466 aaKnown RBP15.79■□□□□ 0.12
CLN6-220ENST00000637450 MAGEB1P43366 347 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 ZNF84P51523 738 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 LMO4P61968 165 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 MYBPC1Q00872 1141 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 CYLC2Q14093 348 aaPredicted RBP15.79■□□□□ 0.12
CLN6-220ENST00000637450 RINLQ6ZS11 566 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 CALHM3Q86XJ0 350 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 NKAIN4Q8IVV8 208 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 OR1J2Q8NGS2 313 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 PFN4Q8NHR9 129 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 ZNF519Q8TB69 540 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 SYNPRQ8TBG9 265 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 C11orf40Q8WZ69 217 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 TMEM186Q96B77 213 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 SIKE1Q9BRV8 207 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 ZNF416Q9BWM5 594 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 HINT3Q9NQE9 182 aaKnown RBP15.79■□□□□ 0.12
CLN6-220ENST00000637450 HIF1ANQ9NWT6 349 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 TREM2Q9NZC2 230 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 SH3GLB1Q9Y371 365 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 A0A0G2JND7 137 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 C17orf100A8MU93 164 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 TRMUO75648 421 aaKnown RBP15.78■□□□□ 0.12
CLN6-220ENST00000637450 OR7A10O76100 309 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 LCKP06239 509 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 MMP7P09237 267 aaPredicted RBP15.78■□□□□ 0.12
CLN6-220ENST00000637450 GAAP10253 952 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 ITGA2P17301 1181 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 AQP2P41181 271 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 RBM34P42696 430 aaKnown RBP15.78■□□□□ 0.12
CLN6-220ENST00000637450 RAD52P43351 418 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 ZNF133P52736 654 aaPredicted RBP15.78■□□□□ 0.12
CLN6-220ENST00000637450 UCP2P55851 309 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 KLF3P57682 345 aaPredicted RBP15.78■□□□□ 0.12
CLN6-220ENST00000637450 ERVS71-1P61550 626 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 PLP2Q04941 152 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 TBC1D28Q2M2D7 210 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 DEF8Q6ZN54 512 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 SYT14Q8NB59 555 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 RBM15BQ8NDT2 890 aaKnown RBP15.78■□□□□ 0.12
CLN6-220ENST00000637450 NOXO1Q8NFA2 376 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 TMEM255BQ8WV15 326 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 LIPHQ8WWY8 451 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 ASB10Q8WXI3 467 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 SGTBQ96EQ0 304 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 TSPAN32Q96QS1 320 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 SH3GL1Q99961 368 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 BCL2L14Q9BZR8 327 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 POLR2J2Q9GZM3 115 aaKnown RBP15.78■□□□□ 0.12
CLN6-220ENST00000637450 POLR2J3Q9H1A7 115 aaKnown RBP15.78■□□□□ 0.12
CLN6-220ENST00000637450 LRMDAQ9H2I8 198 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 OR51B6Q9H340 312 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 SIAEQ9HAT2 523 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 INIPQ9NRY2 104 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 SLCO1C1Q9NYB5 712 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 NKIRAS2Q9NYR9 191 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 RIMS3Q9UJD0 308 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 METRNQ9UJH8 293 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 BAG5Q9UL15 447 aa15.78■□□□□ 0.12
CLN6-220ENST00000637450 IQCMA0A1B0GVH7 501 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 MCIDASD6RGH6 385 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 OR5F1O95221 314 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 MSMBP08118 114 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 TSPAN19P0C672 248 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 ACADSP16219 412 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 TNFRSF1BP20333 461 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 TAS2R41P59536 307 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 CCL8P80075 99 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 PCGF3Q3KNV8 242 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 MMEL1Q495T6 779 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 RABL3Q5HYI8 236 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 C10orf128Q5T292 105 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 ARMC4Q5T2S8 1044 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 TMEM154Q6P9G4 183 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 HDDC2Q7Z4H3 204 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 LRRC18Q8N456 261 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 TMEM239Q8WW34 195 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 LRRC58Q96CX6 371 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 ECSITQ9BQ95 431 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 LPAR2Q9HBW0 351 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 C20orf141Q9NUB4 165 aa15.77■□□□□ 0.12
CLN6-220ENST00000637450 HAX1O00165 279 aa15.76■□□□□ 0.11
CLN6-220ENST00000637450 DAP3P51398 398 aaKnown RBP15.76■□□□□ 0.11
CLN6-220ENST00000637450 MRPS34P82930 218 aaKnown RBP15.76■□□□□ 0.11
CLN6-220ENST00000637450 PIN1Q13526 163 aaPredicted RBP15.76■□□□□ 0.11
CLN6-220ENST00000637450 CPEB3Q8NE35 698 aaKnown RBP15.76■□□□□ 0.11
CLN6-220ENST00000637450 OR8J3Q8NGG0 315 aa15.76■□□□□ 0.11
CLN6-220ENST00000637450 OR51F2Q8NH61 342 aa15.76■□□□□ 0.11
CLN6-220ENST00000637450 MOSPD2Q8NHP6 518 aa15.76■□□□□ 0.11
CLN6-220ENST00000637450 SNX33Q8WV41 574 aa15.76■□□□□ 0.11
CLN6-220ENST00000637450 METTL17Q9H7H0 456 aaPredicted RBP15.76■□□□□ 0.11
CLN6-220ENST00000637450 GRIP1Q9Y3R0 1128 aa15.76■□□□□ 0.11
CLN6-220ENST00000637450 NPIPB13A6NJU9 1138 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 NPIPB4C9JG80 1138 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 FXYD1O00168 92 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 CDC14BO60729 498 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 SHOX2O60902 331 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms