RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 UCN2Q96RP3 112 aa13.67□□□□□ -0.22
CLN6-219ENST00000637329 INTS14Q96SY0 518 aa13.67□□□□□ -0.22
CLN6-219ENST00000637329 ARHGAP9Q9BRR9 750 aa13.67□□□□□ -0.22
CLN6-219ENST00000637329 ALG8Q9BVK2 526 aa13.67□□□□□ -0.22
CLN6-219ENST00000637329 FUNDC2Q9BWH2 189 aa13.67□□□□□ -0.22
CLN6-219ENST00000637329 LDAHQ9H6V9 325 aa13.67□□□□□ -0.22
CLN6-219ENST00000637329 MCTS1Q9ULC4 181 aaKnown RBP13.67□□□□□ -0.22
CLN6-219ENST00000637329 LIPGQ9Y5X9 500 aa13.67□□□□□ -0.22
CLN6-219ENST00000637329 TMEM14AQ9Y6G1 99 aa13.67□□□□□ -0.22
CLN6-219ENST00000637329 IGHV3-15A0A0B4J1V0 119 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 A0A1B0GVC2 190 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 SLC35F4A4IF30 521 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 ZNF726A6NNF4 738 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 ZNF670-ZNF695F2Z2N8 137 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 SELENOFO60613 162 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 KHDRBS3O75525 346 aaKnown RBP13.66□□□□□ -0.22
CLN6-219ENST00000637329 SYNGR4O95473 234 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 MT-ND5P03915 603 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 HRGP04196 525 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 ITGB2P05107 769 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 KLK2P20151 261 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 PTGS2P35354 604 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 LIPAP38571 399 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 NAA10P41227 235 aaPredicted RBP13.66□□□□□ -0.22
CLN6-219ENST00000637329 RGS6P49758 472 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 CLDN17P56750 224 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 TAS2R43P59537 309 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 HIST3H3Q16695 136 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 ZNF322Q6U7Q0 402 aaPredicted RBP13.66□□□□□ -0.22
CLN6-219ENST00000637329 FCRLAQ7L513 359 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 LHFPL3Q86UP9 236 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 CDC20BQ86Y33 519 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 TMEM123Q8N131 208 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 HAVCR2Q8TDQ0 301 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 RNF128Q8TEB7 428 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 ZNRF4Q8WWF5 429 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 INTS12Q96CB8 462 aaKnown RBP13.66□□□□□ -0.22
CLN6-219ENST00000637329 NMD3Q96D46 503 aaKnown RBP13.66□□□□□ -0.22
CLN6-219ENST00000637329 TXNDC15Q96J42 360 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 RBP7Q96R05 134 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 EXO5Q9H790 373 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 WDR76Q9H967 626 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 SRA1Q9HD15 236 aaKnown RBP13.66□□□□□ -0.22
CLN6-219ENST00000637329 NDUFB11Q9NX14 153 aa13.66□□□□□ -0.22
CLN6-219ENST00000637329 IGKV3D-15A0A087WSY6 115 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 A0A1W2PQL4 384 aaPredicted RBP13.65□□□□□ -0.22
CLN6-219ENST00000637329 TRIM64BA6NI03 449 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 HSPB2A8KAH6 182 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 AQP7O14520 342 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 GPR171O14626 319 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 HSMCR30P0CW71 290 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 CD36P16671 472 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 CPEP16870 476 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 ZNF133P52736 654 aaPredicted RBP13.65□□□□□ -0.22
CLN6-219ENST00000637329 PMP22Q01453 160 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 ZNF85Q03923 595 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 HSPB2Q16082 182 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 TBR1Q16650 682 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 CDONQ4KMG0 1287 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 OR2G6Q5TZ20 316 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 SLC16A12Q6ZSM3 486 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 ERI1Q8IV48 349 aaKnown RBP13.65□□□□□ -0.22
CLN6-219ENST00000637329 SYT14Q8NB59 555 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 TMEM45BQ96B21 275 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 OR2M2Q96R28 347 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 EMC6Q9BV81 110 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 PRDM14Q9GZV8 571 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 PRORYQ9H606 182 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 RNF122Q9H9V4 155 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 TRIM36Q9NQ86 728 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 EMC3Q9P0I2 261 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 KLHL9Q9P2J3 617 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 SPRR3Q9UBC9 169 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 B3GNT3Q9Y2A9 372 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 ZNF175Q9Y473 711 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 FLVCR1Q9Y5Y0 555 aa13.65□□□□□ -0.22
CLN6-219ENST00000637329 TNRC6AQ8NDV7 1962 aaKnown RBP13.64□□□□□ -0.23
CLN6-219ENST00000637329 H3BMQ9 156 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 SLC22A1O15245 554 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 GAAP10253 952 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 FCGR2AP12318 317 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 CSNK1A1P48729 337 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 MRPL28Q13084 256 aaKnown RBP13.64□□□□□ -0.23
CLN6-219ENST00000637329 CAMK2DQ13557 499 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 TPBGQ13641 420 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 RNPS1Q15287 305 aaKnown RBP13.64□□□□□ -0.23
CLN6-219ENST00000637329 TSTQ16762 297 aaKnown RBP13.64□□□□□ -0.23
CLN6-219ENST00000637329 CNPY1Q3B7I2 92 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 C10orf128Q5T292 105 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 KCTD20Q7Z5Y7 419 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 SIAH3Q8IW03 269 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 GLB1L2Q8IW92 636 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 ZNF454Q8N9F8 522 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 ZNF511Q8NB15 262 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 SLC26A10Q8NG04 563 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 OR6N2Q8NGY6 317 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 ASB17Q8WXJ9 295 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 UFD1Q92890 307 aa13.64□□□□□ -0.23
CLN6-219ENST00000637329 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms