RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ZNF615Q8N8J6 731 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 LMX1AQ8TE12 382 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 FAM46BQ96A09 425 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 INTS14Q96SY0 518 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 LRRC61Q9BV99 259 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 POLE3Q9NRF9 147 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 UBQLN4Q9NRR5 601 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 KCNN3Q9UGI6 736 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 A0A1B0GUH1 482 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 CCSO14618 274 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 TNFRSF10CO14798 259 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 IGF2P01344 180 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF117Q03924 483 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 MFGE8Q08431 387 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 LRFN4Q6PJG9 635 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF227Q86WZ6 799 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 JAGN1Q8N5M9 183 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 MRPL48Q96GC5 212 aaKnown RBP12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 CYYR1Q96J86 154 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 NPAS1Q99742 590 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 C7orf50Q9BRJ6 194 aaKnown RBP12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 NPDC1Q9NQX5 325 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 AKAP7Q9P0M2 348 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 FBXL3Q9UKT7 428 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 GLSO94925 669 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 TGM6O95932 706 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 HLA-DOBP13765 273 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 ALOX5APP20292 161 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 SKP2Q13309 424 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 OR4S1Q8NGB4 309 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 GPR148Q8TDV2 347 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 PTPMT1Q8WUK0 201 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 RBPMSQ93062 196 aaKnown RBP12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 DMRTA2Q96SC8 542 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 B3GNT4Q9C0J1 378 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 CLEC1BQ9P126 229 aa12.69□□□□□ -0.38
CACNA1A-228ENST00000636610 SPTY2D1-AS1A0A0U1RR47 76 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 ABHD16AO95870 558 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 RENP00797 406 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 POU2F2P09086 479 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 IFNGR1P15260 489 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF28P17035 718 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 IL11P20809 199 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 CD163Q86VB7 1156 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 FAM219AQ8IW50 185 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 SEC22AQ96IW7 307 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 CMKLR1Q99788 373 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 HIF3AQ9Y2N7 669 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 CTDSPLO15194 276 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 SUSD5O60279 629 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 CTAG2O75638 210 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 NDUFB6O95139 128 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 RRASP10301 218 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 ADAM8P78325 824 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 FMODQ06828 376 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 ACKR1Q16570 336 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 TUSC1Q2TAM9 212 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 CLLU1Q5K131 121 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 GLYATL3Q5SZD4 288 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 CDC20BQ86Y33 519 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 CMIPQ8IY22 773 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 FAM3DQ96BQ1 224 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 CMBLQ96DG6 245 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 KLHL15Q96M94 604 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 TRAF4Q9BUZ4 470 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 TINAGL1Q9GZM7 467 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 SYNDIG1Q9H7V2 258 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 GPN1Q9HCN4 374 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 TAS2R5Q9NYW4 299 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 MUC3AQ02505 3323 aa12.68□□□□□ -0.38
CACNA1A-228ENST00000636610 KIR2DS5A0A0G2JLQ3 304 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 A0A0G2JNG1 304 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 LOC101059948A0A1B0GTJ6 334 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 PLSCR5A0PG75 271 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 UBE2QL1A1L167 161 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 GGT3PA6NGU5 568 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 FAM25EA8MYX2 175 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 SHISA8B8ZZ34 492 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 MCRIP1C9JLW8 97 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 KIR2DS3K7RE56 304 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 LPLP06858 475 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 CTLA4P16410 223 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 KIR2DS5Q14953 304 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 PRTGQ2VWP7 1150 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 BAIAP2L2Q6UXY1 529 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 KRT77Q7Z794 578 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 ZSCAN1Q8NBB4 408 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 TTYH1Q9H313 450 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 CENPMQ9NSP4 180 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 SDHAF2Q9NX18 166 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 STEAP1Q9UHE8 339 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 ALOX12BO75342 701 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 SLC25A12O75746 678 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 RAB40ALP0C0E4 278 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 ASAH2BP0C7U1 165 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 RABIFP47224 123 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF626Q68DY1 528 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 ACBD4Q8NC06 268 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms