RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 PNO1Q9NRX1 252 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 ZNF281Q9Y2X9 895 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 CHD8Q9HCK8 2581 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 TEX13CA0A0J9YWL9 993 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 ZNF879B4DU55 563 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 CLDN4O14493 209 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 LDOC1O95751 146 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 TCRBP04435 133 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 SYPP08247 313 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 NME1P15531 152 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 SRMP19623 302 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 STOMP27105 288 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 CDKN2AP42771 156 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 GRK6P43250 576 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 BLKP51451 505 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 NANOS3P60323 173 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 TCF15Q12870 199 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 SNTB2Q13425 540 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 FCN2Q15485 313 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 HYAL4Q2M3T9 481 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 FAM69AQ5T7M9 428 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 OTPQ5XKR4 325 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 SLC22A10Q63ZE4 541 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 LYPD4Q6UWN0 246 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 FAM220AQ7Z4H9 259 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 RNF138Q8WVD3 245 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 MMABQ96EY8 250 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 OR1F2PQ96R84 312 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 ACTR6Q9GZN1 396 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 LAT2Q9GZY6 243 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 CLEC4MQ9H2X3 399 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 HEXA-AS1Q9H8Q6 139 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 EIF3KQ9UBQ5 218 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 ATPIF1Q9UII2 106 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 ELF5Q9UKW6 265 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 PLCL2Q9UPR0 1127 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 ETV7Q9Y603 341 aa6.5□□□□□ -1.37
CTNNA1-244ENST00000627109 MEIKINA0A087WXM9 373 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 A0A0U1RQK1 487 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ZNF320A2RRD8 509 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 PGPEP1LA6NFU8 196 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 IFITM5A6NNB3 132 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 C4orf47A7E2U8 309 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ERVH48-1M5A8F1 160 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 FABP7O15540 132 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 GDF9O60383 454 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 NOS1APO75052 506 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 TGM6O95932 706 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 CD14P08571 375 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 MAGEB1P43366 347 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 MRPS10P82664 201 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 EGR3Q06889 387 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 COTL1Q14019 142 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 CD226Q15762 336 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 HLA-BQ31612 363 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 CADM4Q8NFZ8 388 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ZNF721Q8TF20 911 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 MVB12AQ96EY5 273 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 MED30Q96HR3 178 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 FOXN4Q96NZ1 517 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 SLITRK2Q9H156 845 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 UBQLN4Q9NRR5 601 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ZFP57Q9NU63 452 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 MGAT4AQ9UM21 535 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ERVK-19Q9WJR5 959 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 LAMA1P25391 3075 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 MYO15AQ9UKN7 3530 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 NAP1L6A6NFF2 107 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 PDCD5O14737 125 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 SELENOFO60613 162 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 RAD1O60671 282 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 NPIPB7O75200 414 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ZNF254O75437 659 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 BGLAPP02818 100 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 HIST1H2ABP04908 130 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ANKRD34CP0C6C1 535 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 PTH2RP49190 550 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 GNG2P59768 71 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 BTG2P78543 158 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 TCTE1Q5JU00 501 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 HIST3H2AQ7L7L0 130 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 LINC00469Q8N7U9 141 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 OR6S1Q8NH40 331 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ANGPTL6Q8NI99 470 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 HIST1H2ACQ93077 130 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 SLC25A36Q96CQ1 311 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 RASD2Q96D21 266 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 ADAD1Q96M93 576 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 SLC46A1Q96NT5 459 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 OR8D2Q9GZM6 311 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 FKRPQ9H9S5 495 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 TCF7L1Q9HCS4 588 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 MRM2Q9UI43 246 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 DNAH14Q0VDD8 3507 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 TVP23AA6NH52 213 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 GABARAPH6UMI1 98 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 H7C1C5 153 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 TSPAN2O60636 221 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 DDAH2O95865 285 aa6.49□□□□□ -1.37
CTNNA1-244ENST00000627109 RAF1P04049 648 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms