RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SLC36A2Q495M3 483 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 THEM4Q5T1C6 240 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 SHEQ5VZ18 495 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 ZNF544Q6NX49 715 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 VHLLQ6RSH7 139 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 SLC16A14Q7RTX9 510 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 TGIF2LYQ8IUE0 185 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 SKA3Q8IX90 412 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 LRRC18Q8N456 261 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 ARIH2OSQ8N7S6 290 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 FANK1Q8TC84 345 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 HTRA1Q92743 480 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 KCNK17Q96T54 332 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 FUZQ9BT04 418 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 GSX2Q9BZM3 304 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 KCNN2Q9H2S1 579 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 SEC61A2Q9H9S3 476 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 SMURF2Q9HAU4 748 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 FBXL3Q9UKT7 428 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 SIGLEC7Q9Y286 467 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 ADAM18Q9Y3Q7 739 aa12.15□□□□□ -0.46
PCDHGC3-208ENST00000622836 H7C1C5 153 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 PATE4P0C8F1 98 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 BMP4P12644 408 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 NPR2P20594 1047 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 APOBEC3AP31941 199 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 CDAP32320 146 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 RPS6KA3P51812 740 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 LCN6P62502 163 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 FLOT2Q14254 428 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 SGCAQ16586 387 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 C10orf128Q5T292 105 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 TMEM53Q6P2H8 277 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 SMARCD3Q6STE5 483 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 YTHDF3Q7Z739 585 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 DPPA2Q7Z7J5 298 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZER1Q7Z7L7 766 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 MYPOPQ86VE0 399 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 SPATA24Q86W54 205 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 CLDN22Q8N7P3 220 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 IL17RDQ8NFM7 739 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR4F15Q8NGB8 312 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF519Q8TB69 540 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 GNPDA2Q8TDQ7 276 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 SLC7A6OSQ96CW6 309 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 Q96M85 177 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 TRAF4Q9BUZ4 470 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 DENND2DQ9H6A0 471 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 REEP1Q9H902 201 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 NOX3Q9HBY0 568 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 CCNB1IP1Q9NPC3 277 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 CBLN4Q9NTU7 201 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 B3GNT2Q9NY97 397 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 IER3IP1Q9Y5U9 82 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 HIVEP1P15822 2718 aa12.14□□□□□ -0.47
PCDHGC3-208ENST00000622836 IGHV2OR16-5A0A0B4J2B6 119 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 TEX13CA0A0J9YWL9 993 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 A0A1W2PPL8 197 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 AQP12BA6NM10 295 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 VSTM5A8MXK1 200 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 ACOT8O14734 319 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 PTP4A3O75365 173 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 CCNB2O95067 398 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 RAP2AP10114 183 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 CD99P14209 185 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF26P17031 533 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 FPR3P25089 353 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 CALCRP30988 508 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 SDHAP31040 664 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 MAGEA2P43356 314 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 GALK2Q01415 458 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 BNIP1Q12981 228 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 KRR1Q13601 381 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 RAB39AQ14964 217 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 NRN1LQ496H8 165 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 GPR139Q6DWJ6 353 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR2T5Q6IEZ7 315 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 DPY19L2P2Q6ZN68 376 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 DTX2Q86UW9 622 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 AQP12AQ8IXF9 295 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 LINC00471Q8N535 108 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR2T29Q8NH02 315 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 IGFBPL1Q8WX77 278 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 RASD2Q96D21 266 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 MS4A3Q96HJ5 214 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 GPA33Q99795 319 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 RERGLQ9H628 205 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 SIAEQ9HAT2 523 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 CA10Q9NS85 328 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF701Q9NV72 531 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF224Q9NZL3 707 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 SAMHD1Q9Y3Z3 626 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 SPEF1Q9Y4P9 236 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 LYVE1Q9Y5Y7 322 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 U3KQV3 271 aa12.13□□□□□ -0.47
PCDHGC3-208ENST00000622836 TEP1Q99973 2627 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 DHRS12A0PJE2 317 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms