RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 FAM173AQ9BQD7 235 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 KIF25Q9UIL4 384 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 A0A087WZY1 265 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 ARPC4-TTLL3A0A0A6YYG9 625 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 A0A1W2PNR3 127 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 M0QZ24 198 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CTDSP2O14595 271 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 TNFSF12O43508 249 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 AGFG2O95081 481 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 RAB5BP61020 215 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CAMK2BQ13554 666 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CLVS2Q5SYC1 327 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 FAM71E1Q6IPT2 247 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 TCTN3Q6NUS6 607 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 LPCAT3Q6P1A2 487 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 ZNF836Q6ZNA1 936 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 FCRLAQ7L513 359 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CAMKMTQ7Z624 323 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 NRARPQ7Z6K4 114 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CD163Q86VB7 1156 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 SEMA6DQ8NFY4 1073 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 SECTM1Q8WVN6 248 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 DCUN1D4Q92564 292 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 GGHQ92820 318 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 PIGTQ969N2 578 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 ISL2Q96A47 359 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 TEX101Q9BY14 249 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 ACKR4Q9NPB9 350 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CACNG2Q9Y698 323 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 MYO7AQ13402 2215 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 TRBV4-1A0A0J9YWV2 114 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CRYM-AS1A6NIL9 109 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 ZNF705EA8MWA4 302 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 SERPINA7P05543 415 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 PRKACAP17612 351 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 UCNP55089 124 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 RPL27P61353 136 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 SMN1Q16637 294 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 DUSP5Q16690 384 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 TATDN3Q17R31 274 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 ZNF468Q5VIY5 522 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 DCXRQ7Z4W1 244 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 WDR5BQ86VZ2 330 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 PTRH1Q86Y79 214 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CMTM4Q8IZR5 234 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CA13Q8N1Q1 262 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 PELI3Q8N2H9 469 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 OR10X1Q8NGY0 326 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 HAS2Q92819 552 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 EMC6Q9BV81 110 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 PLA2G3Q9NZ20 509 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 PAPPA2Q9BXP8 1791 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 F5P12259 2224 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 A0A096LPE4 126 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CDHR4A6H8M9 788 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 GFYI3L273 518 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 GAPDHSO14556 408 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 DBPQ10586 325 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 MEP1BQ16820 701 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 PRTGQ2VWP7 1150 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 TRILQ7L0X0 811 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 CISD2Q8N5K1 135 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 GIMAP5Q96F15 307 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 OR51J1Q9H342 316 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 NOX4Q9NPH5 578 aa8.97□□□□□ -0.97
CLTCL1-211ENST00000621271 OR6C6A6NF89 314 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 IGLV3-27P01718 113 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 FABP1P07148 127 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 CLDN6P56747 220 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 TAS2R19P59542 299 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 IL13RA1P78552 427 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 PLA2G7Q13093 441 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 ACTBL2Q562R1 376 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 FAM109BQ6ICB4 259 aaPredicted RBP8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 ANKRD16Q6P6B7 361 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 GDF7Q7Z4P5 450 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 FAM122AQ96E09 287 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 SSX3Q99909 188 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 CRISPLD2Q9H0B8 497 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 GMPR2Q9P2T1 348 aaKnown RBP8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 SLC17A4Q9Y2C5 497 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 PCDHGA5Q9Y5G8 931 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 SH2D7A6NKC9 451 aaPredicted RBP8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 PRAF2O60831 178 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 POU2F2P09086 479 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 QDPRP09417 244 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 TMEM11P17152 192 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 LUMP51884 338 aaPredicted RBP8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 RAC1P63000 192 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 METTL11BQ5VVY1 283 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 METAP1DQ6UB28 335 aaPredicted RBP8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 NLRP8Q86W28 1048 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 LACC1Q8IV20 430 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 SLC22A24Q8N4F4 322 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 OR6T1Q8NGN1 323 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 APOBEC4Q8WW27 367 aaKnown RBP8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 PLA2G2FQ9BZM2 168 aa8.96□□□□□ -0.97
CLTCL1-211ENST00000621271 WWTR1Q9GZV5 400 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms