RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 IFNW1P05000 195 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 LYNX1P0DP58 116 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 NCK1P16333 377 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 CDAP32320 146 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 ALDH3B1P43353 468 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 NUDT2P50583 147 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 ZNF84P51523 738 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 ZNF133P52736 654 aaPredicted RBP14.76□□□□□ -0.05
HMGN3-203ENST00000620514 SEC24CP53992 1094 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 FMODQ06828 376 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 MAD2L1BPQ15013 274 aaPredicted RBP14.76□□□□□ -0.05
HMGN3-203ENST00000620514 IQCCQ4KMZ1 466 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 ALG10Q5BKT4 473 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 C10orf128Q5T292 105 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 TMEM53Q6P2H8 277 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 CBLL1Q75N03 491 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 NRMQ8IXM6 262 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 OFCC1Q8IZS5 231 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 LRRC18Q8N456 261 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 SLC30A7Q8NEW0 376 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 NMD3Q96D46 503 aaKnown RBP14.76□□□□□ -0.05
HMGN3-203ENST00000620514 HSH2DQ96JZ2 352 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 FNDC11Q9BVV2 318 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 TXNIPQ9H3M7 391 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 HIF3AQ9Y2N7 669 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 UGT2A1Q9Y4X1 527 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 CENPBD1B2RD01 187 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 SYNGR3O43761 229 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 ENTPD5O75356 428 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 SERPINA1P01009 418 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 ERCC1P07992 297 aaPredicted RBP14.75□□□□□ -0.05
HMGN3-203ENST00000620514 FAM157BP0CG42 384 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 APEHP13798 732 aaKnown RBP14.75□□□□□ -0.05
HMGN3-203ENST00000620514 TCN1P20061 433 aaPredicted RBP14.75□□□□□ -0.05
HMGN3-203ENST00000620514 IFNA8P32881 189 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 EVX1P49640 407 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 FHL1Q13642 323 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 TRAM2Q15035 370 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 CHRFAM7AQ494W8 412 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 SLC36A2Q495M3 483 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 IFI44LQ53G44 452 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 TBPL2Q6SJ96 375 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 HACD2Q6Y1H2 254 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 HDDC2Q7Z4H3 204 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 CLDN22Q8N7P3 220 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 ARIH2OSQ8N7S6 290 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 LRRC75AQ8NAA5 344 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 RBM15BQ8NDT2 890 aaKnown RBP14.75□□□□□ -0.05
HMGN3-203ENST00000620514 OR51A7Q8NH64 312 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 GEMIN6Q8WXD5 167 aaKnown RBP14.75□□□□□ -0.05
HMGN3-203ENST00000620514 NSMAFQ92636 917 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 MSI2Q96DH6 328 aaKnown RBP14.75□□□□□ -0.05
HMGN3-203ENST00000620514 SOX7Q9BT81 388 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 MYLK2Q9H1R3 596 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 OR51B6Q9H340 312 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 REV1Q9UBZ9 1251 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 SLC7A8Q9UHI5 535 aa14.75□□□□□ -0.05
HMGN3-203ENST00000620514 ZNF346Q9UL40 294 aaKnown RBP14.75□□□□□ -0.05
HMGN3-203ENST00000620514 TRAV27A0A087WT01 109 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 LRP5LA4QPB2 252 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 NPIPB13A6NJU9 1138 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 NPIPB4C9JG80 1138 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 M0R233 179 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 PRSS23O95084 383 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 MMP7P09237 267 aaPredicted RBP14.74□□□□□ -0.05
HMGN3-203ENST00000620514 SAGP10523 405 aaPredicted RBP14.74□□□□□ -0.05
HMGN3-203ENST00000620514 ZNF23P17027 643 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 LSP1P33241 339 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 GZMKP49863 264 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 CTXN1P60606 82 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 ERVS71-1P61550 626 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 RPS23P62266 143 aaKnown RBP14.74□□□□□ -0.05
HMGN3-203ENST00000620514 PRKCDQ05655 676 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 CD47Q08722 323 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 NRN1LQ496H8 165 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 SLC25A47Q6Q0C1 308 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 FKBP9P1Q75LS8 142 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 TSEN54Q7Z6J9 526 aaKnown RBP14.74□□□□□ -0.05
HMGN3-203ENST00000620514 ZNF786Q8N393 782 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 UBASH3BQ8TF42 649 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 NABP1Q96AH0 204 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 CDH20Q9HBT6 801 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 DUSP13Q9UII6 198 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 MALRD1Q5VYJ5 2156 aa14.74□□□□□ -0.05
HMGN3-203ENST00000620514 A0A087WUU8 490 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 LOC100289279A0A1B0GTE1 492 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 EFCAB9A8MZ26 197 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 LMX1BO60663 402 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 GIFP27352 417 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 APEX1P27695 318 aaKnown RBP14.73□□□□□ -0.05
HMGN3-203ENST00000620514 PSME3P61289 254 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 RPL27P61353 136 aaKnown RBP14.73□□□□□ -0.05
HMGN3-203ENST00000620514 MRPS34P82930 218 aaKnown RBP14.73□□□□□ -0.05
HMGN3-203ENST00000620514 SGCAQ16586 387 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 ALKBH6Q3KRA9 238 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 DPPA2Q7Z7J5 298 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 ZNF540Q8NDQ6 660 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 OR13C2Q8NGS9 318 aa14.73□□□□□ -0.05
HMGN3-203ENST00000620514 ACOT11Q8WXI4 607 aaPredicted RBP14.73□□□□□ -0.05
HMGN3-203ENST00000620514 FAM162AQ96A26 154 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms