RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 CAPZA2P47755 286 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 SEC61A1P61619 476 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 MFGE8Q08431 387 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 EIF2B5Q13144 721 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 C2orf76Q3KRA6 126 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 NKAIN2Q5VXU1 208 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 OLFML2AQ68BL7 652 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 LIN54Q6MZP7 749 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 TMEM81Q6P7N7 255 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 CDC20BQ86Y33 519 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 EXD3Q8N9H8 876 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 OR51A2Q8NGJ7 313 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 RAB40AQ8WXH6 277 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 MNTQ99583 582 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 TTYH1Q9H313 450 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 HIF3AQ9Y2N7 669 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 C2orf72A6NCS6 295 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 NAP1L6A6NFF2 107 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 SCDO00767 359 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 LMX1BO60663 402 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 APEHP13798 732 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 S100A11P31949 105 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 DMWDQ09019 674 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 SKP2Q13309 424 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 NKPD1Q17RQ9 610 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 KLHL26Q53HC5 615 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 WBP2NLQ6ICG8 309 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 ASPHD2Q6ICH7 369 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 PRSS42Q7Z5A4 293 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 MARCH3Q86UD3 253 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 TMEM151BQ8IW70 566 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 LRRC75AQ8NAA5 344 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 ZSCAN1Q8NBB4 408 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 OR6M1Q8NGM8 313 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 MRPL48Q96GC5 212 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 TGM7Q96PF1 710 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 INTS14Q96SY0 518 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 REG4Q9BYZ8 158 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 STEAP1Q9UHE8 339 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 RNF215Q9Y6U7 377 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 PIAS3Q9Y6X2 628 aa12.96□□□□□ -0.33
PCDHGA3-203ENST00000619750 UBE2QL1A1L167 161 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 CLDN4O14493 209 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 ZNF749O43361 778 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 UTS2O95399 124 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 SEMA4FO95754 770 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 THEGLP0DJG4 465 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 CALCBP10092 127 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 ALOX5APP20292 161 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 ACHEP22303 614 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 RAP2BP61225 183 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 RBMS2Q15434 407 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 SMAD2Q15796 467 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 GPR148Q8TDV2 347 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 HOXB13Q92826 284 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 FAM131CQ96AQ9 280 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 CYYR1Q96J86 154 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 OR11A1Q9GZK7 315 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 SEMA6CQ9H3T2 930 aa12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 ATXN7L1Q9ULK2 861 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 MRPS33Q9Y291 106 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-203ENST00000619750 CABIN1Q9Y6J0 2220 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 TEX51A0A1B0GUA7 166 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 H7C417 338 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 SLC16A7O60669 478 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 ALOX12BO75342 701 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 RP2O75695 350 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 ASAH2BP0C7U1 165 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 GABRG2P18507 467 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 M6PRP20645 277 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 ZP2Q05996 745 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 SHISA6Q6ZSJ9 500 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 GPAT4Q86UL3 456 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 GALNT16Q8N428 558 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 OR2AK2Q8NG84 335 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 TINAGL1Q9GZM7 467 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 POFUT1Q9H488 388 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 DHCR7Q9UBM7 475 aaKnown RBP12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 MTFP1Q9UDX5 166 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 FBXL3Q9UKT7 428 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 B9D1Q9UPM9 204 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 DMDP11532 3685 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 TRBV5-5A0A0J9YX44 114 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 FITM1A5D6W6 292 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 F5H5P2 479 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 ZNF264O43296 627 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 XRCC3O43542 346 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 RLN2P04090 185 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 CLPSP04118 112 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 HIST1H2ABP04908 130 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 ZNF28P17035 718 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 NUP62P37198 522 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 SPOCK1Q08629 439 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 DMRTC1Q5HYR2 192 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 SLC6A19Q695T7 634 aa12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 C16orf47Q6ZP98 133 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-203ENST00000619750 HIST3H2AQ7L7L0 130 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms