RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	CTDSP2	O14595	271 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	PDPK1	O15530	556 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	WBP4	O75554	376 aa	Known RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	DAP	P51397	102 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CSNK2A1	P68400	391 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	HOXC5	Q00444	222 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ACSM1	Q08AH1	577 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	KCNMB1	Q16558	191 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CTF1	Q16619	201 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	VMAC	Q2NL98	169 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	PCGF3	Q3KNV8	242 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	MFSD12	Q6NUT3	480 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ERICH5	Q6P6B1	374 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	C11orf88	Q6PI97	169 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	EIF3M	Q7L2H7	374 aa	Known RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	COMMD6	Q7Z4G1	85 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	TMPRSS11B	Q86T26	416 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ATG4D	Q86TL0	474 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	JAZF1	Q86VZ6	243 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	KRTAP19-1	Q8IUB9	90 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZNF540	Q8NDQ6	660 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ABHD4	Q8TB40	342 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	NANP	Q8TBE9	248 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	GPR119	Q8TDV5	335 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	YIPF6	Q96EC8	236 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CNRIP1	Q96F85	164 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZNF845	Q96IR2	970 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	NODAL	Q96S42	347 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CDIP1	Q9H305	208 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	RMND5A	Q9H871	391 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ASH2L	Q9UBL3	628 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	GMPPB	Q9Y5P6	360 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	NUP214	P35658	2090 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	FRY	Q5TBA9	3013 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	IGLV3-9	A0A075B6K5	115 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	TRBV23OR9-2	A0A075B6M9	112 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322		A0A0G2JMM0	328 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322		A0A1W2PPB8	328 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322		A0A1W2PRS3	328 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	KIR3DP1	A8MWS1	328 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	SERPINA1	P01009	418 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	MAOA	P21397	527 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	HMGA2	P52926	109 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ART1	P52961	327 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	SLC35A2	P78381	396 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CDK10	Q15131	360 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	RFX4	Q33E94	735 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZNF385B	Q569K4	471 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	C6orf141	Q5SZD1	244 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	TMEM65	Q6PI78	240 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	HDDC2	Q7Z4H3	204 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	GALNT10	Q86SR1	603 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	RNF175	Q8N4F7	328 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	POMGNT2	Q8NAT1	580 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	OR5W2	Q8NH69	310 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CLHC1	Q8NHS4	586 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	HAVCR2	Q8TDQ0	301 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ADAMTS15	Q8TE58	950 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZHX1-C8orf76	Q96EF9	292 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZBTB18	Q99592	522 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	REEP4	Q9H6H4	257 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	PROCR	Q9UNN8	238 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	SAMD4A	Q9UPU9	718 aa	Known RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	PPIAL4A	Q9Y536	164 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	LEUTX	A8MZ59	168 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	SLC1A7	O00341	560 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CST1	P01037	141 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	GAA	P10253	952 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	IRF8	Q02556	426 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CHRNB3	Q05901	458 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CD47	Q08722	323 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	RGN	Q15493	299 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	SMN1	Q16637	294 aa	Known RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	FAM122C	Q6P4D5	195 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	STK32C	Q86UX6	486 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	SIRT6	Q8N6T7	355 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	OR7A2P	Q8NGA2	310 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	OR6F1	Q8NGZ6	308 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	GIMAP1	Q8WWP7	306 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	SELENOM	Q8WWX9	145 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	KISS1R	Q969F8	398 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	TMEM54	Q969K7	222 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	C8orf44	Q96CB5	159 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	EGFL8	Q99944	293 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZNF416	Q9BWM5	594 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	ACTRT3	Q9BYD9	372 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	KLHL9	Q9P2J3	617 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	RNF115	Q9Y4L5	304 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	CNTRL	Q7Z7A1	2325 aa		4.74	□□□□□ -1.65
CBWD3-215	ENST00000619322	LOC100130705	A0A1B0GUX0	176 aa		4.73	□□□□□ -1.65
CBWD3-215	ENST00000619322	ZNF98	A6NK75	572 aa		4.73	□□□□□ -1.65
CBWD3-215	ENST00000619322	SLC22A20	A6NK97	555 aa		4.73	□□□□□ -1.65
CBWD3-215	ENST00000619322	OR5F1	O95221	314 aa		4.73	□□□□□ -1.65
CBWD3-215	ENST00000619322	YES1	P07947	543 aa		4.73	□□□□□ -1.65
CBWD3-215	ENST00000619322	LAMP1	P11279	417 aa		4.73	□□□□□ -1.65
CBWD3-215	ENST00000619322	EFNA1	P20827	205 aa	Predicted RBP	4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms