RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 NTNG2Q96CW9 530 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 NOX4Q9NPH5 578 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 P4HTMQ9NXG6 502 aa15.53■□□□□ 0.08
PCDHGC3-205ENST00000617641 ZNF814B7Z6K7 855 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 PHYHO14832 338 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 PIN1P1O15428 100 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 PTTG1O95997 202 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 ICAM2P13598 275 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 P2RY4P51582 365 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 GLO1Q04760 184 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 LRRN1Q6UXK5 716 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 SPATC1Q76KD6 591 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 DND1Q8IYX4 353 aaKnown RBP15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 OR1J4Q8NGS1 313 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 SOSTQ9BQB4 213 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 TTYH2Q9BSA4 534 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 FANCFQ9NPI8 374 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 FREM3P0C091 2139 aa15.52■□□□□ 0.08
PCDHGC3-205ENST00000617641 A0A1W2PQ09 198 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZNF879B4DU55 563 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 SSX4O60224 188 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 ELK1P19419 428 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 KLK2P20151 261 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 APEX1P27695 318 aaKnown RBP15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 CDC20Q12834 499 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 CHAF1BQ13112 559 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 P2RY14Q15391 338 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 HSD17B12Q53GQ0 312 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 YIF1BQ5BJH7 314 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 HES3Q5TGS1 186 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 NHLRC1Q6VVB1 395 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 GDPD3Q7L5L3 318 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 GTPBP8Q8N3Z3 284 aaPredicted RBP15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR5AK2Q8NH90 309 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 SLC25A43Q8WUT9 341 aaPredicted RBP15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 ELOVL3Q9HB03 270 aa15.52■□□□□ 0.07
PCDHGC3-205ENST00000617641 A0A087WZY1 265 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 FAM25AB3EWG3 89 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 FAM25CB3EWG5 89 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 FAM25GB3EWG6 89 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 WNT11O96014 354 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 PAHP00439 452 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 CSF3P09919 207 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 TAB1Q15750 504 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 CEP78Q5JTW2 689 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 TMEM164Q5U3C3 297 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 FAM205BPQ63HN1 556 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 SLC18B1Q6NT16 456 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 GPAT4Q86UL3 456 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 GDPD1Q8N9F7 314 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR2G2Q8NGZ5 317 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 KIAA1143Q96AT1 154 aaPredicted RBP15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 KCTD12Q96CX2 325 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR8B4Q96RC9 309 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 A0A0G2JMM0 328 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 LINC00854A0A1B0GVQ3 168 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 A0A1W2PPB8 328 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 A0A1W2PRS3 328 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 KIR3DP1A8MWS1 328 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 SLC19A2O60779 497 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 RAMP1O60894 148 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 PTGS2P35354 604 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 MRPL28Q13084 256 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 EIF2B1Q14232 305 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 RAET1LQ5VY80 246 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 TRILQ7L0X0 811 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 UEVLDQ8IX04 471 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 ESX1Q8N693 406 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 SUMF1Q8NBK3 374 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 SLC26A10Q8NG04 563 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 SLC25A18Q9H1K4 315 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 PPP1R3EQ9H7J1 279 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 DKKL1Q9UK85 242 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 ADAM30Q9UKF2 790 aa15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 AK6Q9Y3D8 172 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-205ENST00000617641 CACNA1CQ13936 2221 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 OR4C45A6NMZ5 311 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZIC3O60481 467 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 DLSTP36957 453 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 DNASE1L1P49184 302 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 DSCR4P56555 118 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 IL18Q14116 193 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 SLC17A1Q14916 467 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 ODF4Q2M2E3 257 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 TIGD3Q6B0B8 471 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 DNM1P34Q6PK57 102 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 ZNF554Q86TJ5 538 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 PRSS35Q8N3Z0 413 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 SAMD12Q8N8I0 201 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 ADPRHL1Q8NDY3 354 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 ASB17Q8WXJ9 295 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 DERL3Q96Q80 235 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 HDGFL3Q9Y3E1 203 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 MRPS18BQ9Y676 258 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 A0A0B4J203 849 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 NOTOA8MTQ0 251 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 SULT2B1O00204 365 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 SERPINA7P05543 415 aa15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 EIF4EP06730 217 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-205ENST00000617641 ATF1P18846 271 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms