RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 KXD1Q9BQD3 176 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 C20orf24Q9BUV8 137 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 SELENOIQ9C0D9 397 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 ZNF350Q9GZX5 532 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 CERS4Q9HA82 394 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 RASL12Q9NYN1 266 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 FRRS1LQ9P0K9 344 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 ADAM29Q9UKF5 820 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 MED12Q93074 2177 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 COL4A3Q01955 1670 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 DCTN6O00399 190 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 VEGFDO43915 354 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 OR10H2O60403 315 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 IL5P05113 134 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 RAB40ALP0C0E4 278 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 CT62P0C5K7 136 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 ADAM8P78325 824 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 FABP9Q0Z7S8 132 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 RUNX2Q13950 521 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 Q499Y3 187 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 OR2L13Q8N349 312 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 OR1M1Q8NGA1 313 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 RAB40AQ8WXH6 277 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 MBD2Q9UBB5 411 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 MRPS2Q9Y399 296 aaKnown RBP11.98□□□□□ -0.49
MSH6-214ENST00000616033 INSL6Q9Y581 213 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 KIF26BQ2KJY2 2108 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 CPED1A4D0V7 1026 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 TMEM235A6NFC5 223 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 GGT3PA6NGU5 568 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 RFPL4AA6NLU0 287 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 RFPL4AL1F8VTS6 287 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 H7C417 338 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 UBBP0CG47 229 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 UBCP0CG48 685 aaKnown RBP11.98□□□□□ -0.49
MSH6-214ENST00000616033 MGMTP16455 207 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 PPIAP62937 165 aaKnown RBP11.98□□□□□ -0.49
MSH6-214ENST00000616033 RPS27AP62979 156 aaKnown RBP11.98□□□□□ -0.49
MSH6-214ENST00000616033 UBA52P62987 128 aaKnown RBP11.98□□□□□ -0.49
MSH6-214ENST00000616033 S100A12P80511 92 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 C2orf76Q3KRA6 126 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 TMEM35AQ53FP2 167 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 OR52W1Q6IF63 320 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 KIRREL2Q6UWL6 708 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 BPIFB2Q8N4F0 458 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 AKR7LQ8NHP1 331 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 RXFP4Q8TDU9 374 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 LCORQ96JN0 433 aaPredicted RBP11.98□□□□□ -0.49
MSH6-214ENST00000616033 TMPRSS13Q9BYE2 586 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 SLC25A32Q9H2D1 315 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 EPHX3Q9H6B9 360 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 WDR76Q9H967 626 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 MTFP1Q9UDX5 166 aa11.98□□□□□ -0.49
MSH6-214ENST00000616033 TMEM218A2RU14 115 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 EFCAB7A8K855 629 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 FGF17O60258 216 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 ACTL6AO96019 429 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 GP1BAP07359 652 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 RHOP08100 348 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 ADCYAP1P18509 176 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 TLX1P31314 330 aaPredicted RBP11.97□□□□□ -0.49
MSH6-214ENST00000616033 DUSP8Q13202 625 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 IKZF1Q13422 519 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 ERV3-1Q14264 604 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 ARHGAP11BQ3KRB8 267 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 SLC22A6Q4U2R8 563 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 WDSUB1Q8N9V3 476 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 SUSD6Q92537 303 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 ZBTB8AQ96BR9 441 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 CMBLQ96DG6 245 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 HIDE1A8MVS5 230 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 PGAM2P15259 253 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 PI3P19957 117 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 ADH6P28332 368 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 P2RY2P41231 377 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 CDKN2AP42771 156 aaKnown RBP11.97□□□□□ -0.49
MSH6-214ENST00000616033 LSSP48449 732 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 CXADRP78310 365 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 SPOCK1Q08629 439 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 SSX2Q16385 188 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 OR2B11Q5JQS5 317 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 TMPRSS11FQ6ZWK6 438 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 ERN2Q76MJ5 926 aaKnown RBP11.97□□□□□ -0.49
MSH6-214ENST00000616033 GABRG1Q8N1C3 465 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 DCUN1D4Q92564 292 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 LRRC3BQ96PB8 259 aa11.97□□□□□ -0.49
MSH6-214ENST00000616033 MKKSQ9NPJ1 570 aaPredicted RBP11.97□□□□□ -0.49
MSH6-214ENST00000616033 ZNF629Q9UEG4 869 aaPredicted RBP11.97□□□□□ -0.49
MSH6-214ENST00000616033 CXorf65A6NEN9 183 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 ITGA5P08648 1049 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 SLC35G6P0C7Q6 338 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 ZNF14P17017 642 aaPredicted RBP11.96□□□□□ -0.49
MSH6-214ENST00000616033 CMPK1P30085 196 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 CTXN1P60606 82 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 TRA2BP62995 288 aaKnown RBP11.96□□□□□ -0.49
MSH6-214ENST00000616033 AIMP2Q13155 320 aaKnown RBP11.96□□□□□ -0.49
MSH6-214ENST00000616033 DHRS2Q13268 280 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 NR0B2Q15466 257 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 DEFB110Q30KQ9 67 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms