RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 ATG101Q9BSB4 218 aa9.46□□□□□ -0.89
TNFAIP3-208ENST00000615468 CWH43Q9H720 699 aa9.46□□□□□ -0.89
TNFAIP3-208ENST00000615468 CALML5Q9NZT1 146 aa9.46□□□□□ -0.89
TNFAIP3-208ENST00000615468 STEAP1Q9UHE8 339 aa9.46□□□□□ -0.89
TNFAIP3-208ENST00000615468 TAC3Q9UHF0 121 aa9.46□□□□□ -0.89
TNFAIP3-208ENST00000615468 KPTNQ9Y664 436 aa9.46□□□□□ -0.89
TNFAIP3-208ENST00000615468 URGCP-MRPS24S4R325 110 aa9.46□□□□□ -0.89
TNFAIP3-208ENST00000615468 ZNF736B4DX44 427 aaPredicted RBP9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 XRCC3O43542 346 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 TMPRSS11DO60235 418 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 TSPAN15O95858 294 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 SPARCP09486 303 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 F3P13726 295 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 PSMB6P28072 239 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 EFNB2P52799 333 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 ACTBP60709 375 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 S100A10P60903 97 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 SNRPD1P62314 119 aaKnown RBP9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 ACTG1P63261 375 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 ALG11Q2TAA5 492 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 EIF5AL1Q6IS14 154 aaKnown RBP9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 CMTM8Q8IZV2 173 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR2AP1Q8NGE2 309 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 TMEM239Q8WW34 195 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 BPIFA2Q96DR5 249 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 AMDHD1Q96NU7 426 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 PRAP1Q96NZ9 151 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 GFI1Q99684 422 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 MACROD1Q9BQ69 325 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 RAB33BQ9H082 229 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 INSL5Q9Y5Q6 135 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 FGF16O43320 207 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 EMC8O43402 210 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 CTNSO60931 367 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZFPL1O95159 310 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 CALCBP10092 127 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 TAS2R19P59542 299 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 RANBP3LQ86VV4 465 aaPredicted RBP9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 NAXEQ8NCW5 288 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 PHOSPHO2Q8TCD6 241 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 PMM1Q92871 262 aa9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 ELF4Q99607 663 aaPredicted RBP9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 LSM7Q9UK45 103 aaKnown RBP9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 PUS1Q9Y606 427 aaKnown RBP eCLIP9.46□□□□□ -0.9
TNFAIP3-208ENST00000615468 PPP1R2P9O14990 202 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 OGG1O15527 345 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 IGHV2-5P01817 119 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 CD74P04233 296 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 CTSLP07711 333 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 C6P13671 934 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF84P51523 738 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 RPS11P62280 158 aaKnown RBP eCLIP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 C10orf91Q5T1B1 145 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 ATPAF1Q5TC12 328 aaPredicted RBP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 TMEM244Q5VVB8 128 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 NSUN5P2Q63ZY6 315 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 TSEN15Q8WW01 171 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 ASB13Q8WXK3 278 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 DNAJA3Q96EY1 480 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR7D2Q96RA2 312 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 TNFRSF13CQ96RJ3 184 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 NRSN2Q9GZP1 204 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 CLEC4EQ9ULY5 219 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 MRPS33Q9Y291 106 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 MED31Q9Y3C7 131 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 WIF1Q9Y5W5 379 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 A0A087WV48 116 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 SOCS5O75159 536 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 CD8AP01732 235 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR8G3PP0DMU2 310 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 CD79AP11912 226 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC25A4P12235 298 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 HMGA1P17096 107 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 MECP2P51608 486 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 LBX1P52954 281 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR8G1Q15617 311 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 AKR1C8PQ5T2L2 129 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 LIPNQ5VXI9 398 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 LPCAT3Q6P1A2 487 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 TMEM150AQ86TG1 271 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 AMER3Q8N944 861 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR9A1PQ8NGU1 263 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 JSRP1Q96MG2 331 aaPredicted RBP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC25A21Q9BQT8 299 aaPredicted RBP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 BCL2L10Q9HD36 194 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 ADAM18Q9Y3Q7 739 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 WDR45Q9Y484 360 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 HELZP42694 1942 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF726A6NNF4 738 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 TGM5O43548 720 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 SOX15O60248 233 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 GPRIN2O60269 458 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 ALOX12BO75342 701 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 MOSPD3O75425 235 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 FABP4P15090 132 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 MYOGP15173 224 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 IL9P15248 144 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 HPGDP15428 266 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 PAX6P26367 422 aa9.45□□□□□ -0.9
TNFAIP3-208ENST00000615468 MC3RP41968 323 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms