RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 AADACL4Q5VUY2 407 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 GID4Q8IVV7 300 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 ENTHD1Q8IYW4 607 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 TMEM123Q8N131 208 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 ZIC4Q8N9L1 334 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 RAB2BQ8WUD1 216 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 HDAC2Q92769 488 aaKnown RBP5.56□□□□□ -1.52
CBWD3-210ENST00000614398 SLC25A36Q96CQ1 311 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 GMPPAQ96IJ6 420 aaPredicted RBP5.56□□□□□ -1.52
CBWD3-210ENST00000614398 Q96MT0 163 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 KCNK17Q96T54 332 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 IFT27Q9BW83 186 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 JAM3Q9BX67 310 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 ENKD1Q9H0I2 346 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 NARFLQ9H6Q4 476 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 EXO5Q9H790 373 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 TMEM185BQ9H7F4 350 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 HAO2Q9NYQ3 351 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 ZNF221Q9UK13 617 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 RNF6Q9Y252 685 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 CAB39Q9Y376 341 aaPredicted RBP5.56□□□□□ -1.52
CBWD3-210ENST00000614398 PCDHGB5Q9Y5G0 923 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 FLVCR1Q9Y5Y0 555 aa5.56□□□□□ -1.52
CBWD3-210ENST00000614398 SPEGQ15772 3267 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 FREM3P0C091 2139 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 TRAV6A0A075B6T7 132 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 A0A1B0GTH9 108 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 SLC22A20A6NK97 555 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 TOR1AO14656 332 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 PRODHO43272 600 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 RNF13O43567 381 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 PPP1R3DO95685 299 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 IL18BPO95998 194 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 IGFBP1P08833 259 aaPredicted RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 SLC2A5P22732 501 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 CEACAM8P31997 349 aaPredicted RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 EIF1AXP47813 144 aaKnown RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 GGTLC2Q14390 218 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ACKR1Q16570 336 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ZIK1Q3SY52 487 aaPredicted RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 TBRG1Q3YBR2 411 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 NRN1LQ496H8 165 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 YIF1BQ5BJH7 314 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 MESTQ5EB52 335 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 RBM48Q5RL73 367 aaKnown RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 C10orf128Q5T292 105 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 NXNL2Q5VZ03 156 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 C19orf48Q6RUI8 117 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 SLC35D2Q76EJ3 337 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 SPATC1Q76KD6 591 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ZBTB46Q86UZ6 589 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 MEX3DQ86XN8 651 aaKnown RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 SLC37A3Q8NCC5 494 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 NPEPL1Q8NDH3 523 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ATP6V1C2Q8NEY4 427 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 CYGBQ8WWM9 190 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ERMAPQ96PL5 475 aaPredicted RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 RACGAP1Q9H0H5 632 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 PARPBPQ9NWS1 579 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 FOXD3Q9UJU5 478 aaPredicted RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ZNF346Q9UL40 294 aaKnown RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 DIMT1Q9UNQ2 313 aaKnown RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 MOKQ9UQ07 419 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 CAMK2AQ9UQM7 478 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 IER3IP1Q9Y5U9 82 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 FKBP7Q9Y680 259 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 IGF2RP11717 2491 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 IRGMA1A4Y4 181 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 PRSS37A4D1T9 235 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 BLOC1S5-TXNDC5H3BN57 136 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 RPL36A-HNRNPH2H7BZ11 118 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 PGA4P0DJD7 388 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 PGA3P0DJD8 388 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ZNF43P17038 809 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 PAICSP22234 425 aaKnown RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 RPL4P36578 427 aaKnown RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 SLC15A1P46059 708 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 GABARAPL2P60520 117 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 CD47Q08722 323 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 RASGEF1BQ0VAM2 473 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 TSC22D1Q15714 1073 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 KCNMB1Q16558 191 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 Q3ZCU0 254 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 GXYLT1Q4G148 440 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 PXDC1Q5TGL8 231 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 UBE2UQ5VVX9 321 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 RNLSQ5VYX0 342 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 DNM1P34Q6PK57 102 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 XKRXQ6PP77 449 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ZNF767PQ75MW2 155 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 ZNF627Q7L945 461 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 CHMP1BQ7LBR1 199 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 C20orf196Q8IYI0 205 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 CISD2Q8N5K1 135 aaKnown RBP5.55□□□□□ -1.52
CBWD3-210ENST00000614398 NOXO1Q8NFA2 376 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 APH1BQ8WW43 257 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 SMPDL3BQ92485 455 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 RFKQ969G6 155 aa5.55□□□□□ -1.52
CBWD3-210ENST00000614398 SLC25A44Q96H78 314 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms