RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 SEC14L4Q9UDX3 406 aa7.55□□□□□ -1.2
CCL3-205ENST00000613928 YARS2Q9Y2Z4 477 aaKnown RBP7.55□□□□□ -1.2
CCL3-205ENST00000613928 SLC6A5Q9Y345 797 aa7.55□□□□□ -1.2
CCL3-205ENST00000613928 WIF1Q9Y5W5 379 aa7.55□□□□□ -1.2
CCL3-205ENST00000613928 CHCHD2Q9Y6H1 151 aaPredicted RBP7.55□□□□□ -1.2
CCL3-205ENST00000613928 CPAMD8Q8IZJ3 1885 aa7.55□□□□□ -1.2
CCL3-205ENST00000613928 TEX13CA0A0J9YWL9 993 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 LOC101059948A0A1B0GTJ6 334 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 UBE2QL1A1L167 161 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 OR6C68A6NDL8 312 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 TRABD2BA6NFA1 517 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 C12orf71A8MTZ7 269 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 VSTM5A8MXK1 200 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 FTCDNL1E5RQL4 147 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 TP53I11O14683 189 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 IDH3BO43837 385 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 RAD1O60671 282 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 SLC25A12O75746 678 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 TXNDC12O95881 172 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 HPP00738 406 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 PLATP00750 562 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 MT-ATP6P00846 226 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 GYPBP06028 91 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 INHBBP09529 407 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 SBK2P0C263 348 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 CDK4P11802 303 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 APEHP13798 732 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 IL11P20809 199 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 GRPRP30550 384 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 APOBEC1P41238 236 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 CDKN2AP42771 156 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 SSR4P51571 173 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 RPS7P62081 194 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 RPS15P62841 145 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 ROR2Q01974 943 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 ZNF85Q03923 595 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 TPBGQ13641 420 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 PRAMEF20Q5VT98 475 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 C1orf140Q5VVS0 124 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 TMEM81Q6P7N7 255 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 OPN5Q6U736 354 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 NANOGNBQ7Z5D8 188 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 PHC2Q8IXK0 858 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 ESX1Q8N693 406 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 FADS6Q8N9I5 356 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 WDSUB1Q8N9V3 476 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 LSM14AQ8ND56 463 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 OR6S1Q8NH40 331 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 SPRYD4Q8WW59 207 aaPredicted RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 SLC25A36Q96CQ1 311 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 TSPAN32Q96QS1 320 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 SECISBP2Q96T21 854 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 NMNAT3Q96T66 252 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 CHCHD6Q9BRQ6 235 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 CENPOQ9BU64 300 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 DCSTAMPQ9H295 470 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 PROK2Q9HC23 129 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 SDHAF3Q9NRP4 125 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 DKK4Q9UBT3 224 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 ZNF346Q9UL40 294 aaKnown RBP7.54□□□□□ -1.2
CCL3-205ENST00000613928 VDAC3Q9Y277 283 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 SDK2Q58EX2 2172 aa7.54□□□□□ -1.2
CCL3-205ENST00000613928 ZNF462Q96JM2 2506 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 MPDZO75970 2070 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 A0A087WV48 116 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 LOC100506127A0A0U1RQW1 187 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 M0R3G1 203 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 LRRTM2O43300 516 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 ZNF208O43345 1280 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 TNFSF15O95150 251 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 AHSA1O95433 338 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 TFP02787 698 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 HIST1H2ABP04908 130 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 MRPL3P09001 348 aaKnown RBP7.53□□□□□ -1.2
CCL3-205ENST00000613928 CCL3P10147 92 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 SPI1P17947 270 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 PAICSP22234 425 aaKnown RBP7.53□□□□□ -1.2
CCL3-205ENST00000613928 ATP6V1E1P36543 226 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 DLSTP36957 453 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 CRYBB2P43320 205 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 CLK1P49759 484 aaKnown RBP7.53□□□□□ -1.2
CCL3-205ENST00000613928 DIO1P49895 249 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 RPS3AP61247 264 aaKnown RBP7.53□□□□□ -1.2
CCL3-205ENST00000613928 ACSM1Q08AH1 577 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 C1DQ13901 141 aaKnown RBP7.53□□□□□ -1.2
CCL3-205ENST00000613928 GGTLC2Q14390 218 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 SGCBQ16585 318 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 PLPPR5Q32ZL2 321 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 MESTQ5EB52 335 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 FAM69AQ5T7M9 428 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 LINC01590Q5TEZ4 76 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 LIPKQ5VXJ0 399 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 B3GNTL1Q67FW5 361 aaPredicted RBP7.53□□□□□ -1.2
CCL3-205ENST00000613928 H3F3CQ6NXT2 135 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 LEG1Q6P5S2 330 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 ZNF322Q6U7Q0 402 aaPredicted RBP7.53□□□□□ -1.2
CCL3-205ENST00000613928 C5orf46Q6UWT4 87 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 HIST3H2AQ7L7L0 130 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 GHDCQ8N2G8 530 aa7.53□□□□□ -1.2
CCL3-205ENST00000613928 ACBD7Q8N6N7 88 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms