RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 DLL4Q9NR61 685 aa10.71□□□□□ -0.69
CBWD1-221ENST00000613355 SLC7A8Q9UHI5 535 aa10.71□□□□□ -0.69
CBWD1-221ENST00000613355 GPR160Q9UJ42 338 aa10.71□□□□□ -0.69
CBWD1-221ENST00000613355 IGHV2OR16-5A0A0B4J2B6 119 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 TRIM64A6NGJ6 449 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 TRIM64BA6NI03 449 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 AHCYL1O43865 530 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 NDUFB2O95178 105 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 IGHMP01871 453 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 SERPINA5P05154 406 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 TSPAN19P0C672 248 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 MAKP20794 623 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 APLNRP35414 380 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 RPS6KA3P51812 740 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 EFNA4P52798 201 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 PCBD1P61457 104 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 PPP2R2BQ00005 443 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 SGCAQ16586 387 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 C10orf128Q5T292 105 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 ARMC4Q5T2S8 1044 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 C11orf71Q6IPW1 123 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 KRT80Q6KB66 452 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 PODNL1Q6PEZ8 512 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 LRFN4Q6PJG9 635 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 SKA3Q8IX90 412 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 ALDH16A1Q8IZ83 802 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 OR13C2Q8NGS9 318 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 FAM46AQ96IP4 442 aaKnown RBP10.7□□□□□ -0.7
CBWD1-221ENST00000613355 ZNF570Q96NI8 536 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 TNFRSF13CQ96RJ3 184 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 MRPL13Q9BYD1 178 aaKnown RBP10.7□□□□□ -0.7
CBWD1-221ENST00000613355 TRIM15Q9C019 465 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 SEC61A2Q9H9S3 476 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 SIAEQ9HAT2 523 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 NOX3Q9HBY0 568 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 MAN2C1Q9NTJ4 1040 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 B3GNT2Q9NY97 397 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 NDUFAF4Q9P032 175 aa10.7□□□□□ -0.7
CBWD1-221ENST00000613355 ZNF346Q9UL40 294 aaKnown RBP10.7□□□□□ -0.7
CBWD1-221ENST00000613355 A0A1W2PPL8 197 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 FFAR1O14842 300 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 IGHV4-39P01824 125 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 HEXAP06865 529 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 CD14P08571 375 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 CELA3BP08861 270 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 CALCRP30988 508 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 MRPS34P82930 218 aaKnown RBP10.69□□□□□ -0.7
CBWD1-221ENST00000613355 VLDLRP98155 873 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 TNK1Q13470 666 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 RAB39AQ14964 217 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 EFNB3Q15768 340 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 HIST3H3Q16695 136 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 GPR139Q6DWJ6 353 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 IGFN1Q86VF2 1251 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 LRRC18Q8N456 261 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 LINC00471Q8N535 108 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 FITM2Q8N6M3 262 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 SLC30A7Q8NEW0 376 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 OR52J3Q8NH60 311 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 SLC7A13Q8TCU3 470 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 FAM168AQ92567 244 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 NSMAFQ92636 917 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 SH3GL3Q99963 347 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 ACTR3BQ9P1U1 418 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 EIF3KQ9UBQ5 218 aaKnown RBP10.69□□□□□ -0.7
CBWD1-221ENST00000613355 CD300AQ9UGN4 299 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 GDF2Q9UK05 429 aaPredicted RBP10.69□□□□□ -0.7
CBWD1-221ENST00000613355 PRPF19Q9UMS4 504 aaKnown RBP10.69□□□□□ -0.7
CBWD1-221ENST00000613355 CADP27708 2225 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 ITPR3Q14573 2671 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 ROS1P08922 2347 aa10.69□□□□□ -0.7
CBWD1-221ENST00000613355 SH3PXD2BA1X283 911 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 C12orf71A8MTZ7 269 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 OR10H3O60404 316 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 KRT36O76013 467 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 PRSS23O95084 383 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 MT-ND5P03915 603 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 SLC25A16P16260 332 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 ZNF14P17017 642 aaPredicted RBP10.68□□□□□ -0.7
CBWD1-221ENST00000613355 NR4A1P22736 598 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 RRM2P31350 389 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 THBS4P35443 961 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 GLRXP35754 106 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 RAD52P43351 418 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 PPOXP50336 477 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 PDLIM4P50479 330 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 ADIPOQQ15848 244 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 FXNQ16595 210 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 MOGQ16653 247 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 FAM98BQ52LJ0 330 aaKnown RBP10.68□□□□□ -0.7
CBWD1-221ENST00000613355 DNM1P34Q6PK57 102 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 TBPL2Q6SJ96 375 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 ARL9Q6T311 187 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 DHFR2Q86XF0 187 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 ZDHHC21Q8IVQ6 265 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 ARIH2OSQ8N7S6 290 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 ZNF454Q8N9F8 522 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 ZNF540Q8NDQ6 660 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 BCAS4Q8TDM0 211 aa10.68□□□□□ -0.7
CBWD1-221ENST00000613355 HDAC2Q92769 488 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms