RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 GTDC1Q4AE62 458 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 SPATA46Q5T0L3 261 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 HIST2H2BDQ6DRA6 164 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 C16orf87Q6PH81 154 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 NHLRC1Q6VVB1 395 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 WDR88Q6ZMY6 472 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 PARP8Q8N3A8 854 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 OR5J2Q8NH18 312 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 OR6X1Q8NH79 312 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 IPCEF1Q8WWN9 437 aaPredicted RBP14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 GEMIN6Q8WXD5 167 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 UBE2FQ969M7 185 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 ZNF566Q969W8 418 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 DCLRE1CQ96SD1 692 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 DIRC2Q96SL1 478 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 MEAF6Q9HAF1 191 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 BCL2L10Q9HD36 194 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 NPHS2Q9NP85 383 aa14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.53□□□□□ -0.08
CSNK1E-215ENST00000612795 ZSCAN5BA6NJL1 495 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 DHHO43323 396 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 IGHV2-70P01814 119 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 IL6P05231 212 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 ZCCHC18P0CG32 403 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 PRKAR1BP31321 381 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 SLC1A6P48664 564 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 MMP15P51511 669 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 SEC61A1P61619 476 aaKnown RBP14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 IFFO1Q0D2I5 559 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 C6orf10Q5SRN2 563 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 CEP85LQ5SZL2 805 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 SLC35D2Q76EJ3 337 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 JAZF1Q86VZ6 243 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 KIR3DL3Q8N743 410 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 EIF1ADQ8N9N8 165 aaKnown RBP14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 OR52E2Q8NGJ4 325 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 MAL2Q969L2 176 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 VPS33AQ96AX1 596 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 C20orf27Q9GZN8 174 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 RMND5AQ9H871 391 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 BEX1Q9HBH7 125 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 TMEM27Q9HBJ8 222 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 CYSLTR2Q9NS75 346 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 OR5V1Q9UGF6 321 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 EGFL7Q9UHF1 273 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 LGALS13Q9UHV8 139 aa14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 POLR3KQ9Y2Y1 108 aaPredicted RBP14.52□□□□□ -0.09
CSNK1E-215ENST00000612795 TIMM23O14925 209 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 CRYBA1P05813 215 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 NUDT7P0C024 238 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 IGHV4-38-2P0DP08 117 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 MPV17P39210 176 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 RGS8P57771 180 aaPredicted RBP14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 MELKQ14680 651 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 ESCO2Q56NI9 601 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 THEM4Q5T1C6 240 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 OR4F5Q8NH21 305 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 ITCHQ96J02 903 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 SORT1Q99523 831 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 PATZ1Q9HBE1 687 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 A4GALTQ9NPC4 353 aa14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 CGGBP1Q9UFW8 167 aaPredicted RBP14.51□□□□□ -0.09
CSNK1E-215ENST00000612795 TRAV40A0A0B4J280 105 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 A0A0B4J2E0 115 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 A0A1B0GX12 115 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 TYROBPO43914 113 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 MT-ATP6P00846 226 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 QDPRP09417 244 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 ETS2P15036 469 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 LIPAP38571 399 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 SLC6A9P48067 706 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 ZNF84P51523 738 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 RAG2P55895 527 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 HNRNPA0Q13151 305 aaKnown RBP14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 ZMAT1Q5H9K5 638 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 ZNF362Q5T0B9 420 aaPredicted RBP14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 LRFN4Q6PJG9 635 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 UNQ6126/PRO20091Q6UXV3 157 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 COMTD1Q86VU5 262 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 LRRC18Q8N456 261 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 HIPK4Q8NE63 616 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 SLC25A40Q8TBP6 338 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 SLC25A44Q96H78 314 aaPredicted RBP14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 TMEM43Q9BTV4 400 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 SLC19A3Q9BZV2 496 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 RAD21L1Q9H4I0 556 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 DCAF16Q9NXF7 216 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 EIF3KQ9UBQ5 218 aaKnown RBP14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 SLC13A4Q9UKG4 626 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 ZDHHC8Q9ULC8 765 aa14.5□□□□□ -0.09
CSNK1E-215ENST00000612795 MDFIC2A0A1B0GVS7 189 aa14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 A8MXK9 166 aa14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 SDHDO14521 159 aa14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 HOXA3O43365 443 aaPredicted RBP14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 RNF13O43567 381 aa14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 PGA4P0DJD7 388 aa14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 PGA3P0DJD8 388 aa14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 STOMP27105 288 aa14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 CLRN1P58418 232 aa14.49□□□□□ -0.09
CSNK1E-215ENST00000612795 TNFAIP6P98066 277 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms