RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PITPNAQ00169 270 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 CORO6Q6QEF8 472 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 MAMDC2Q7Z304 686 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 DND1Q8IYX4 353 aaKnown RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZNF441Q8N8Z8 693 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 PLPP7Q8NBV4 271 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR11G2Q8NGC1 345 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 OTOSQ8NHW6 89 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR6C1Q96RD1 312 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 SEC22CQ9BRL7 303 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 EMC6Q9BV81 110 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 C20orf85Q9H1P6 137 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 SUSD2Q9UGT4 822 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 ADAMTS20P59510 1910 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 C7orf66A4D0T2 115 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 ANXA2P2A6NMY6 339 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 ANXA2P07355 339 aaKnown RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 CAPZA2P47755 286 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 P2RX1P51575 399 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 CBFBQ13951 182 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 MVB12AQ96EY5 273 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZFP64Q9NPA5 681 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 NUBP2Q9Y5Y2 271 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 RALGAPA1Q6GYQ0 2036 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 TRBV5-5A0A0J9YX44 114 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR6A2O95222 327 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 STOMP27105 288 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 SSTR2P30874 369 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLC6A8P48029 635 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 ARRB1P49407 418 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZP1P60852 638 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 RPL27P61353 136 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR7A5Q15622 319 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 FAM69AQ5T7M9 428 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 C9orf62Q8N4C0 152 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZNF519Q8TB69 540 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 ADAMTS14Q8WXS8 1223 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 C4orf45Q96LM5 186 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 MGAT4AQ9UM21 535 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 EIF1AYO14602 144 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 PDCD5O14737 125 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 ARPC1BO15143 372 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 SSNA1O43805 119 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 NPIPB7O75200 414 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 ITGA5P08648 1049 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 SELENOPP49908 381 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 POLR2HP52434 150 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 SGCBQ16585 318 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 PTCRAQ6ISU1 281 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR4D10Q8NGI6 311 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 MRPL48Q96GC5 212 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 CHIAQ9BZP6 476 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 CHRNA10Q9GZZ6 450 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 EML6Q6ZMW3 1958 aa12.67□□□□□ -0.38
PCDHGA3-202ENST00000612467 PHF3Q92576 2039 aaKnown RBP12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 IGLV1-36A0A0B4J1U3 117 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLC22A23A1A5C7 686 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 PLPP3O14495 311 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 CD1AP06126 327 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 ANXA7P20073 488 aaKnown RBP12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 RAD52P43351 418 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 EIF1AXP47813 144 aaKnown RBP12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 PNLIPRP2P54317 469 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 TAS2R20P59543 309 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 TNK1Q13470 666 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 NDUFA5Q16718 116 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 TIGD3Q6B0B8 471 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLA2Q9H6Q3 261 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 A0A1W2PQM1 296 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 TO15178 435 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 IFNGR1P15260 489 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 NAT1P18440 290 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 EIF2B1Q14232 305 aaKnown RBP12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLC17A1Q14916 467 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 LINC00303Q3SY05 128 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 GPR139Q6DWJ6 353 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR51A2Q8NGJ7 313 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 S100A16Q96FQ6 103 aaKnown RBP12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR8B4Q96RC9 309 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 ABHD6Q9BV23 337 aa12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 CGGBP1Q9UFW8 167 aaPredicted RBP12.66□□□□□ -0.38
PCDHGA3-202ENST00000612467 A8MVM7 634 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 K7ESF4 209 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 EIF4E2O60573 245 aaKnown RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 KRT33AO76009 404 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 ART1P52961 327 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 DCAF7P61962 342 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 EMC4Q5J8M3 183 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 TMEM205Q6UW68 189 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 NDUFAF7Q7L592 441 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 CITED4Q96RK1 184 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 CCNL2Q96S94 520 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 GTPBP2Q9BX10 602 aaKnown RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 COMMD4Q9H0A8 199 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 NIPAL2Q9H841 368 aa12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 ELF5Q9UKW6 265 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA3-202ENST00000612467 COL5A1P20908 1838 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms