RNA–Protein interactions for RNA: ENST00000611852.4

CCDC28A-202, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-202ENST00000611852 AMIGO2Q86SJ2 522 aa14.46□□□□□ -0.1
CCDC28A-202ENST00000611852 CDC20BQ86Y33 519 aa14.46□□□□□ -0.1
CCDC28A-202ENST00000611852 OR52L1Q8NGH7 329 aa14.46□□□□□ -0.1
CCDC28A-202ENST00000611852 OR8D4Q8NGM9 314 aa14.46□□□□□ -0.1
CCDC28A-202ENST00000611852 BDH2Q9BUT1 245 aa14.46□□□□□ -0.1
CCDC28A-202ENST00000611852 C1QTNF6Q9BXI9 259 aa14.46□□□□□ -0.1
CCDC28A-202ENST00000611852 ESRP2Q9H6T0 727 aaKnown RBP14.46□□□□□ -0.1
CCDC28A-202ENST00000611852 TMEM38BQ9NVV0 291 aa14.46□□□□□ -0.1
CCDC28A-202ENST00000611852 CADP27708 2225 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 SLC22A23A1A5C7 686 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 ZNF503-AS2A6NEH8 195 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 DPRXA6NFQ7 191 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 BHLHE40O14503 412 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 IMPA2O14732 288 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 AHCYL1O43865 530 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 SOX14O95416 240 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 IGFBP1P08833 259 aaPredicted RBP14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 ANXA8P13928 327 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 ZNF84P51523 738 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 TUBA1BP68363 451 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 TUBA4AP68366 448 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 BSPH1Q075Z2 132 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 KLHL17Q6TDP4 642 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 PTCHD4Q6ZW05 846 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 TUBA1AQ71U36 451 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 ADCK1Q86TW2 530 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 CCDC36Q8IYA8 594 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 OR5K1Q8NHB7 308 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 STMN2Q93045 179 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 TMEM204Q9BSN7 226 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 RASSF4Q9H2L5 321 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 REV1Q9UBZ9 1251 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 UGT2A1Q9Y4X1 527 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 TACC2O95359 2948 aa14.45□□□□□ -0.1
CCDC28A-202ENST00000611852 SPG11Q96JI7 2443 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 ROS1P08922 2347 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 H3BNX3 289 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 IDH3BO43837 385 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 ATP6V1G2O95670 118 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 PAX7P23759 505 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 NOS3P29474 1203 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 CDKN2AP42771 156 aaKnown RBP14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 NRN1LQ496H8 165 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 ZFP1Q6P2D0 407 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 SLC22A24Q8N4F4 322 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 NSMAFQ92636 917 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 HTRA1Q92743 480 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 LURAP1Q96LR2 239 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 TSSK6Q9BXA6 273 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 PLEKHF2Q9H8W4 249 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 TBC1D23Q9NUY8 699 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 ZNF224Q9NZL3 707 aa14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 VSX1Q9NZR4 365 aaPredicted RBP14.44□□□□□ -0.1
CCDC28A-202ENST00000611852 AKAP6Q13023 2319 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 POLQO75417 2590 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 M0R1B8 84 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 ENTPD5O75356 428 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 HLA-HP01893 362 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 OR8G3PP0DMU2 310 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 HIST1H1CP16403 213 aaKnown RBP14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 CDAP32320 146 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 CAPZA2P47755 286 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 MRPS34P82930 218 aaKnown RBP14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 SNCBQ16143 134 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 SLC36A3Q495N2 470 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 FAHD1Q6P587 224 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 TMEM108Q6UXF1 575 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 SKA3Q8IX90 412 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 ATG16L2Q8NAA4 619 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 CENPNQ96H22 339 aaPredicted RBP14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 SYT4Q9H2B2 425 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 SEMA6AQ9H2E6 1030 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 ZNF556Q9HAH1 456 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 B3GNT2Q9NY97 397 aa14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 CRNNQ9UBG3 495 aaPredicted RBP14.43□□□□□ -0.1
CCDC28A-202ENST00000611852 G3V2T6 193 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 FARS2O95363 451 aaKnown RBP14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 PLAUP00749 431 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 IGKV3-15P01624 115 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 CD3EP07766 207 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 CBR1P16152 277 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 CTLA4P16410 223 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 ZNF23P17027 643 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 PTAFRP25105 342 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 CD40P25942 277 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 ETFDHQ16134 617 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 SLC35F1Q5T1Q4 408 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 MDP1Q86V88 176 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 JAZF1Q86VZ6 243 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 HIPK1Q86Z02 1210 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 LNX2Q8N448 690 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 FAM169BQ8N8A8 192 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 OR4K13Q8NH42 304 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 NABP1Q96AH0 204 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 NMNAT3Q96T66 252 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 SH3GL3Q99963 347 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 SIAEQ9HAT2 523 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 MOV10Q9HCE1 1003 aaKnown RBP14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 RNF115Q9Y4L5 304 aa14.42□□□□□ -0.1
CCDC28A-202ENST00000611852 H3BN98 237 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms