RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 BCL2L14Q9BZR8 327 aa12.71□□□□□ -0.37
CTSA-216ENST00000607212 IKZF5Q9H5V7 419 aa12.71□□□□□ -0.37
CTSA-216ENST00000607212 CCNB1IP1Q9NPC3 277 aa12.71□□□□□ -0.37
CTSA-216ENST00000607212 SLC7A7Q9UM01 511 aa12.71□□□□□ -0.37
CTSA-216ENST00000607212 IGHV1-69-2A0A0G2JMI3 117 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 A0A1W2PRG6 482 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 M0QX08 132 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 FMO6PO60774 539 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 GPX2P18283 190 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 LMO4P61968 165 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 HFEQ30201 348 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 DCAF12L2Q5VW00 463 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 DPPA2Q7Z7J5 298 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 DHDDSQ86SQ9 333 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 TREML1Q86YW5 311 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 LRRC17Q8N6Y2 441 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 SYT14Q8NB59 555 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 OR6T1Q8NGN1 323 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 OR1J1Q8NGS3 322 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 ADAMTS16Q8TE57 1224 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 ARHGDIGQ99819 225 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 CPPED1Q9BRF8 314 aaPredicted RBP12.7□□□□□ -0.38
CTSA-216ENST00000607212 CCDC28BQ9BUN5 200 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 SUCNR1Q9BXA5 334 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 RACGAP1Q9H0H5 632 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 SAP30LQ9HAJ7 183 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 TMBIM4Q9HC24 238 aa12.7□□□□□ -0.38
CTSA-216ENST00000607212 EIF3KQ9UBQ5 218 aaKnown RBP12.7□□□□□ -0.38
CTSA-216ENST00000607212 LEF1Q9UJU2 399 aaPredicted RBP12.7□□□□□ -0.38
CTSA-216ENST00000607212 TRAPPC13A5PLN9 417 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 ANGPT2O15123 496 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 SPRY3O43610 288 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 RP2O75695 350 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 TGDSO95455 350 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 ADRA2CP18825 462 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 CD247P20963 164 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 GCH1P30793 250 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 MRPL19P49406 292 aaKnown RBP12.69□□□□□ -0.38
CTSA-216ENST00000607212 UCP2P55851 309 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 MTPNP58546 118 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 ZP4Q12836 540 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 MMEL1Q495T6 779 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 LRFN4Q6PJG9 635 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 NHLRC1Q6VVB1 395 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 GTF3AQ92664 365 aaKnown RBP12.69□□□□□ -0.38
CTSA-216ENST00000607212 RAB1CQ92928 201 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 MCHR2Q969V1 340 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 C7orf26Q96N11 449 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 ZNF347Q96SE7 839 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 GAL3ST1Q99999 423 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 SLCO1B3Q9NPD5 702 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 TAS2R5Q9NYW4 299 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 UBAP1Q9NZ09 502 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 ZNF229Q9UJW7 825 aa12.69□□□□□ -0.38
CTSA-216ENST00000607212 PLSCR5A0PG75 271 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 PLPP2O43688 288 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 ERLIN1O75477 346 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 F13BP05160 661 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 PGA4P0DJD7 388 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 PGA3P0DJD8 388 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 ZNF250P15622 560 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 H2AFXP16104 143 aaPredicted RBP12.68□□□□□ -0.38
CTSA-216ENST00000607212 CRYBB2P43320 205 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 ZNF81P51508 661 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 HILS1P60008 231 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 NPTX1Q15818 432 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 DUSP7Q16829 419 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 RUNDC3AQ59EK9 446 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 SPATA46Q5T0L3 261 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 HDDC2Q7Z4H3 204 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 RBM45Q8IUH3 476 aaKnown RBP12.68□□□□□ -0.38
CTSA-216ENST00000607212 NOXO1Q8NFA2 376 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 GPR32P1Q8NGA4 272 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 NANPQ8TBE9 248 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 FAM216AQ8WUB2 273 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 CCL17Q92583 94 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 TLCD1Q96CP7 247 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 ELMOD3Q96FG2 381 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 SLC6A7Q99884 636 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 RABEP2Q9H5N1 569 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 WIPI2Q9Y4P8 454 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 WNK2Q9Y3S1 2297 aa12.68□□□□□ -0.38
CTSA-216ENST00000607212 TRBV5-3A0A0A0MS03 114 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 LIMS1P48059 325 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 DAP3P51398 398 aaKnown RBP12.67□□□□□ -0.38
CTSA-216ENST00000607212 CD47Q08722 323 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 NFYCQ13952 458 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 SGCAQ16586 387 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 ZNF718Q3SXZ3 478 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 PABPC1L2AQ5JQF8 200 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 UNQ6126/PRO20091Q6UXV3 157 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 LINC00114Q6XXX2 140 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 C1QL2Q7Z5L3 287 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 PATL1Q86TB9 770 aaKnown RBP12.67□□□□□ -0.38
CTSA-216ENST00000607212 PTOV1Q86YD1 416 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 SLC30A8Q8IWU4 369 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 ST7LQ8TDW4 575 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 NSMAFQ92636 917 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 MPP4Q96JB8 637 aa12.67□□□□□ -0.38
CTSA-216ENST00000607212 EGLN1Q9GZT9 426 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms