RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 SKA3Q8IX90 412 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 MAPK1IP1LQ8NDC0 245 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 OR51A7Q8NH64 312 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 MOSPD2Q8NHP6 518 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 NEU4Q8WWR8 484 aaPredicted RBP12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 MS4A3Q96HJ5 214 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 ZNF347Q96SE7 839 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 SH3GL3Q99963 347 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 MRPL13Q9BYD1 178 aaKnown RBP12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 SIAEQ9HAT2 523 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 CDH20Q9HBT6 801 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 CCNB1IP1Q9NPC3 277 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 ENPP4Q9Y6X5 453 aa12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 NIPBLQ6KC79 2804 aaeCLIP12.47□□□□□ -0.41
PKNOX1-210ENST00000607049 LOC390937A0A1W2PQ73 354 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 XKRYO14609 159 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 H1F0P07305 194 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 NCK1P16333 377 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 USF1P22415 310 aaPredicted RBP12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 GLRXP35754 106 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 SMIM11AP58511 58 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 CTXN1P60606 82 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 RPL27P61353 136 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 MYBPC1Q00872 1141 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 LOXL1Q08397 574 aaPredicted RBP12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 SAMD4BQ5PRF9 694 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 C10orf128Q5T292 105 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 ARMC4Q5T2S8 1044 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 C16orf89Q6UX73 402 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 SVOPLQ8N434 492 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 RBM15BQ8NDT2 890 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 SLC30A7Q8NEW0 376 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 C10orf105Q8TEF2 133 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 MCUR1Q96AQ8 359 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 TNFRSF13CQ96RJ3 184 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 SEPHS2Q99611 448 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 MS4A5Q9H3V2 200 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 NMNAT1Q9HAN9 279 aaPredicted RBP12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 GRHPRQ9UBQ7 328 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 EGFL7Q9UHF1 273 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 TAGLN3Q9UI15 199 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 MAGEL2Q9UJ55 1249 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 CSPG4Q6UVK1 2322 aa12.46□□□□□ -0.41
PKNOX1-210ENST00000607049 SH3PXD2BA1X283 911 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 INAFM1C9JVW0 142 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 J3KTA2 159 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 M0R233 179 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 CD5LO43866 347 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 PIP5K1CO60331 668 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 TSPAN19P0C672 248 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 ZNF35P13682 527 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 RHCEP18577 417 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 APLNRP35414 380 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 RAD52P43351 418 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 PCBD1P61457 104 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 MRPS34P82930 218 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 SGCAQ16586 387 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 SPATS1Q496A3 300 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 FGD3Q5JSP0 725 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 MYPOPQ86VE0 399 aaPredicted RBP12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 WDFY1Q8IWB7 410 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 LRRC18Q8N456 261 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 MRPL24Q96A35 216 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 SORCS2Q96PQ0 1159 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 GORASP2Q9H8Y8 452 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 YAE1D1Q9NRH1 226 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 DCAF13Q9NV06 445 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 GMPR2Q9P2T1 348 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 ALPK2Q86TB3 2170 aa12.45□□□□□ -0.42
PKNOX1-210ENST00000607049 TRAV27A0A087WT01 109 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 A0A087WUU8 490 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 A0A1W2PPW3 197 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 A0A1W2PRQ8 180 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 FFAR1O14842 300 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 SYNGR3O43761 229 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 IGHMP01871 453 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 PATE4P0C8F1 98 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 TCN1P20061 433 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 MAKP20794 623 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 ZNF133P52736 654 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 VLDLRP98155 873 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 RUNX1T1Q06455 604 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 DGCR6Q14129 220 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 MOGQ16653 247 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 ZBED5Q49AG3 693 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 IQCCQ4KMZ1 466 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 TMPRSS11FQ6ZWK6 438 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 PGAM4Q8N0Y7 254 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 ANKS4BQ8N8V4 417 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 C11orf40Q8WZ69 217 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 NSMAFQ92636 917 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 DOK1Q99704 481 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 BCL2L14Q9BZR8 327 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 MAN2C1Q9NTJ4 1040 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 ZNF224Q9NZL3 707 aa12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 EIF3KQ9UBQ5 218 aaKnown RBP12.44□□□□□ -0.42
PKNOX1-210ENST00000607049 DUSP13Q9UII6 198 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms