RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 CENPNQ96H22 339 aaPredicted RBP12.5□□□□□ -0.41
CTSA-211ENST00000606066 ERMAPQ96PL5 475 aaPredicted RBP12.5□□□□□ -0.41
CTSA-211ENST00000606066 NIPSNAP1Q9BPW8 284 aa12.5□□□□□ -0.41
CTSA-211ENST00000606066 ESRP2Q9H6T0 727 aaKnown RBP12.5□□□□□ -0.41
CTSA-211ENST00000606066 EGLN3Q9H6Z9 239 aa12.5□□□□□ -0.41
CTSA-211ENST00000606066 RASSF1Q9NS23 344 aa12.5□□□□□ -0.41
CTSA-211ENST00000606066 TBC1D23Q9NUY8 699 aa12.5□□□□□ -0.41
CTSA-211ENST00000606066 KIF17Q9P2E2 1029 aa12.5□□□□□ -0.41
CTSA-211ENST00000606066 SLC25A15Q9Y619 301 aa12.5□□□□□ -0.41
CTSA-211ENST00000606066 DNHD1Q96M86 4753 aa12.5□□□□□ -0.41
CTSA-211ENST00000606066 MAP1AP78559 2803 aaPredicted RBP12.5□□□□□ -0.41
CTSA-211ENST00000606066 ARPC4-TTLL3A0A0A6YYG9 625 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 PRSS37A4D1T9 235 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 FARS2O95363 451 aaKnown RBP12.49□□□□□ -0.41
CTSA-211ENST00000606066 MYBPC1Q00872 1141 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 MESTQ5EB52 335 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 C10orf128Q5T292 105 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 SVOPLQ8N434 492 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 WDR31Q8NA23 367 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
CTSA-211ENST00000606066 PIK3IP1Q96FE7 263 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 CLEC4MQ9H2X3 399 aaPredicted RBP12.49□□□□□ -0.41
CTSA-211ENST00000606066 BAIAP2Q9UQB8 552 aa12.49□□□□□ -0.41
CTSA-211ENST00000606066 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.48□□□□□ -0.41
CTSA-211ENST00000606066 A0A1W2PR80 420 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 SLC22A23A1A5C7 686 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 DEFB108AA8MXU0 73 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 H3BN98 237 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 SOCS2O14508 198 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 HRGP04196 525 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 OR8G3PP0DMU2 310 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 B4GALT1P15291 398 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 ZNF23P17027 643 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 NPR2P20594 1047 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 PRKACGP22612 351 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 CAPZA2P47755 286 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 TMEM108Q6UXF1 575 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 AMIGO2Q86SJ2 522 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 JAZF1Q86VZ6 243 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 HS3ST5Q8IZT8 346 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 OR2T33Q8NG76 320 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 TEX47Q8TBZ9 253 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 STMN2Q93045 179 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 RASD2Q96D21 266 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 NMD3Q96D46 503 aaKnown RBP12.48□□□□□ -0.41
CTSA-211ENST00000606066 PLPPR2Q96GM1 343 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 TSSK6Q9BXA6 273 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 TMEM38BQ9NVV0 291 aa12.48□□□□□ -0.41
CTSA-211ENST00000606066 ABCA2Q9BZC7 2435 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 SEC14L2O76054 403 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 SOX14O95416 240 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 SLC2A10O95528 541 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 RENP00797 406 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 OSMP13725 252 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 PTAFRP25105 342 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 DNM1P34Q6PK57 102 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 DPPA2Q7Z7J5 298 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 SLC22A24Q8N4F4 322 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 NSMAFQ92636 917 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 RADILQ96JH8 1075 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 SNX18Q96RF0 628 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 OSBPL10Q9BXB5 764 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 TEX12Q9BXU0 123 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 PLA2G12AQ9BZM1 189 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 SEMA6AQ9H2E6 1030 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 KCNN2Q9H2S1 579 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 SIAEQ9HAT2 523 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 S100A14Q9HCY8 104 aa12.47□□□□□ -0.41
CTSA-211ENST00000606066 PAPOLBQ9NRJ5 636 aaKnown RBP12.47□□□□□ -0.41
CTSA-211ENST00000606066 VSX1Q9NZR4 365 aaPredicted RBP12.47□□□□□ -0.41
CTSA-211ENST00000606066 H3BNX3 289 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 H7C1C5 153 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 BHLHE40O14503 412 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
CTSA-211ENST00000606066 UBL3O95164 117 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 CD3EP07766 207 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 CD79AP11912 226 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 CBR1P16152 277 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 HIST1H1CP16403 213 aaKnown RBP12.46□□□□□ -0.41
CTSA-211ENST00000606066 POU1F1P28069 291 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 CRABP1P29762 137 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 ARR3P36575 388 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 CDKN2AP42771 156 aaKnown RBP12.46□□□□□ -0.41
CTSA-211ENST00000606066 ZNF83P51522 516 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 LCN6P62502 163 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 MRPS34P82930 218 aaKnown RBP12.46□□□□□ -0.41
CTSA-211ENST00000606066 FMODQ06828 376 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 C3orf36Q3SXR2 165 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 SLC36A3Q495N2 470 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 NCMAPQ5T1S8 102 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 FAHD1Q6P587 224 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 LEG1Q6P5S2 330 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 LNX2Q8N448 690 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms