RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 GRIP2Q9C0E4 1043 aa12.5□□□□□ -0.41
TUBE1-208ENST00000604743 CA10Q9NS85 328 aa12.5□□□□□ -0.41
TUBE1-208ENST00000604743 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 CENPBD1B2RD01 187 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 H7C1C5 153 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 SSX4O60224 188 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 IGHMP01871 453 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 FOSL1P15407 271 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 ZNF14P17017 642 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-208ENST00000604743 THBS4P35443 961 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 SMIM11AP58511 58 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 LCN6P62502 163 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 HGFACQ04756 655 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 DAG1Q14118 895 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 RAB35Q15286 201 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 SGCAQ16586 387 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 ANKDD1AQ495B1 522 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 IQCCQ4KMZ1 466 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 Q71RC1 249 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-208ENST00000604743 ZDHHC21Q8IVQ6 265 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 IL17RDQ8NFM7 739 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 ZNF75AQ96N20 296 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 RBP7Q96R05 134 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 KCNK17Q96T54 332 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 KRCC1Q9NPI7 259 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-208ENST00000604743 ACTR3BQ9P1U1 418 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 GRHPRQ9UBQ7 328 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 IL20RAQ9UHF4 553 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 ADAM18Q9Y3Q7 739 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 PMF1-BGLAPU3KQ54 211 aa12.49□□□□□ -0.41
TUBE1-208ENST00000604743 UNC119BA6NIH7 251 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 A6NIZ1 184 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 NPIPB13A6NJU9 1138 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 NPIPB4C9JG80 1138 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 ENTPD5O75356 428 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 OR4A8P0C604 315 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 BMP4P12644 408 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 ZNF26P17031 533 aaPredicted RBP12.48□□□□□ -0.41
TUBE1-208ENST00000604743 RRM2P31350 389 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 SERPINF1P36955 418 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 OMPP47874 163 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 NUDT6P53370 316 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 RAP1BP61224 184 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 RAP1AP62834 184 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
TUBE1-208ENST00000604743 TNK1Q13470 666 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 SLC36A2Q495M3 483 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 C10orf128Q5T292 105 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 TMEM53Q6P2H8 277 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 TRPM8Q7Z2W7 1104 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 DHFR2Q86XF0 187 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 NUP37Q8NFH4 326 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 ZNF519Q8TB69 540 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 RSRC1Q96IZ7 334 aaKnown RBP12.48□□□□□ -0.41
TUBE1-208ENST00000604743 CLPTM1LQ96KA5 538 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 DHRS1Q96LJ7 313 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 Q96M85 177 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 NDEL1Q9GZM8 345 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 KCNN2Q9H2S1 579 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 TMCC3Q9ULS5 477 aa12.48□□□□□ -0.41
TUBE1-208ENST00000604743 SETD2Q9BYW2 2564 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 A0A1W2PPL8 197 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 SH3PXD2BA1X283 911 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 VSTM5A8MXK1 200 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 XKRYO14609 159 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 OR10H3O60404 316 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 NDUFB2O95178 105 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 CD14P08571 375 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 NR2C1P13056 603 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 CCL2P13500 99 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 LIMS1P48059 325 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 SNRPD2P62316 118 aaKnown RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 MS4A2Q01362 244 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 GALK2Q01415 458 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 TRIM25Q14258 630 aaKnown RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 ADIPOQQ15848 244 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 MST1LQ2TV78 715 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 FAM205BPQ63HN1 556 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 ARIH2OSQ8N7S6 290 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 CCDC124Q96CT7 223 aaKnown RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 RASD2Q96D21 266 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 NMD3Q96D46 503 aaKnown RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 ZNF570Q96NI8 536 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 GPA33Q99795 319 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 VRK1Q99986 396 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 THTPAQ9BU02 230 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 DENND2DQ9H6A0 471 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 CCNB1IP1Q9NPC3 277 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 IL1RAPQ9NPH3 570 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 TAS2R1Q9NYW7 299 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 SIGLEC7Q9Y286 467 aa12.47□□□□□ -0.41
TUBE1-208ENST00000604743 CHD3Q12873 2000 aaKnown RBP12.47□□□□□ -0.41
TUBE1-208ENST00000604743 CR1P17927 2039 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 TEX13CA0A0J9YWL9 993 aa12.46□□□□□ -0.41
TUBE1-208ENST00000604743 RNF223E7ERA6 249 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms