RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FOXK2Q01167 660 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 ASAH1Q13510 395 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 BAK1Q16611 211 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 MRPL10Q7Z7H8 261 aaKnown RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 TCEAL8Q8IYN2 117 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SIGLECL1Q8N7X8 197 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 OR10R2Q8NGX6 335 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PLK3Q9H4B4 646 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 USP22Q9UPT9 525 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 OR6C76A6NM76 312 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 EIF4EP06730 217 aaKnown RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PVRP15151 417 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 IL3RAP26951 378 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 DDOSTP39656 456 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SLC35A2P78381 396 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 RAB33AQ14088 237 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 NR0B2Q15466 257 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 ARHGAP11BQ3KRB8 267 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 KDM4DQ6B0I6 523 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 STT3BQ8TCJ2 826 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 ST8SIA2Q92186 375 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SIAEQ9HAT2 523 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 ARSAP15289 507 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 ALKBH1Q13686 389 aaKnown RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PLAC9Q5JTB6 97 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 VHLLQ6RSH7 139 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 KANSL1Q7Z3B3 1105 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 LILRA2Q8N149 483 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 OR10J5Q8NHC4 309 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PARP12Q9H0J9 701 aaKnown RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SSSCA1O60232 199 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 IGFBP1P08833 259 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 DEFB133Q30KQ1 61 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 COX20Q5RI15 118 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 OR2L13Q8N349 312 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PRSS35Q8N3Z0 413 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 OR51S1Q8NGJ8 323 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 CLEC2DQ9UHP7 191 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 GJB3O75712 270 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SYT6Q5T7P8 510 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 GDF7Q7Z4P5 450 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SYT9Q86SS6 491 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 LMNTD1Q8N9Z9 388 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 TIMM29Q9BSF4 260 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 GNB4Q9HAV0 340 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 IL23AQ9NPF7 189 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 HEYLQ9NQ87 328 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 GPR55Q9Y2T6 319 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 HRH3Q9Y5N1 445 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 CSAG2Q9Y5P2 127 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PRSS44E7EML9 344 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 HSD17B6O14756 317 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 DRD1P21728 446 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PAX6P26367 422 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 MEP1BQ16820 701 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 OR5M11Q96RB7 305 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 NMNAT3Q96T66 252 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 H2AFB1P0C5Y9 115 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 APEHP13798 732 aaKnown RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SEMA3BQ13214 749 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 HAGHQ16775 308 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SCD5Q86SK9 330 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 SLC22A11Q9NSA0 550 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 B3GALNT1O75752 331 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 FURINP09958 794 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PARS2Q7L3T8 475 aaKnown RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 OR6M1Q8NGM8 313 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 UBTD2Q8WUN7 234 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 TOE1Q96GM8 510 aaKnown RBP8.87□□□□□ -0.99
CSMD1-217ENST00000602723 KCNJ15Q99712 375 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 PISDQ9UG56 409 aa8.87□□□□□ -0.99
CSMD1-217ENST00000602723 P2RY10O00398 339 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 SPINT2O43291 252 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 PAPLNO95428 1278 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 SLC10A3P09131 477 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 FCER1GP30273 86 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 GTF2H5Q6ZYL4 71 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 FAM185AQ8N0U4 392 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 ZNF251Q9BRH9 671 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 TM7SF3Q9NS93 570 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 DOK2O60496 412 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 CD46P15529 392 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 SRP9P49458 86 aaKnown RBP8.86□□□□□ -0.99
CSMD1-217ENST00000602723 SSR4P51571 173 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 GABREP78334 506 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 JAG1P78504 1218 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 PMPCAQ10713 525 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 SNTB1Q13884 538 aaKnown RBP8.86□□□□□ -0.99
CSMD1-217ENST00000602723 OVCH1Q7RTY7 1134 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 LINC00346Q8IVM7 164 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 SLC7A6Q92536 515 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 ZNF586Q9NXT0 402 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 TAAR2Q9P1P5 351 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 KPTNQ9Y664 436 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 RIF1Q5UIP0 2472 aaKnown RBP8.86□□□□□ -0.99
CSMD1-217ENST00000602723 SERINC4A6NH21 518 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 FUCA1P04066 466 aa8.86□□□□□ -0.99
CSMD1-217ENST00000602723 GIPP09681 153 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-217ENST00000602723 FYTTD1Q96QD9 318 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms