RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 PSMA6P60900 246 aaKnown RBP13.06□□□□□ -0.32
SMG9-211ENST00000601170 EBPQ15125 230 aaKnown RBP13.06□□□□□ -0.32
SMG9-211ENST00000601170 CLLU1Q5K131 121 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 SUN5Q8TC36 379 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 DHCR7Q9UBM7 475 aaKnown RBP13.06□□□□□ -0.32
SMG9-211ENST00000601170 MTFP1Q9UDX5 166 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 B9D1Q9UPM9 204 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 SPEGQ15772 3267 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 ALPK2Q86TB3 2170 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 COL5A1P20908 1838 aaPredicted RBP13.06□□□□□ -0.32
SMG9-211ENST00000601170 GGT3PA6NGU5 568 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 PYCARD-AS1I3L0S3 204 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 RAD1O60671 282 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 CTAG2O75638 210 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 TPPPO94811 219 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 IL5P05113 134 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 ITGA5P08648 1049 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 GIPP09681 153 aaPredicted RBP13.06□□□□□ -0.32
SMG9-211ENST00000601170 NR0B1P51843 470 aaKnown RBP13.06□□□□□ -0.32
SMG9-211ENST00000601170 SIGIRRQ6IA17 410 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 ANKRD16Q6P6B7 361 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 C9orf40Q8IXQ3 194 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 UXS1Q8NBZ7 420 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 OR52B4Q8NGK2 314 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 OR4C16Q8NGL9 310 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 OR1F2PQ96R84 312 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 PTDSS2Q9BVG9 487 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 KCNK15Q9H427 330 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 EPHA6Q9UF33 1036 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 GTF2A1LQ9UNN4 478 aa13.06□□□□□ -0.32
SMG9-211ENST00000601170 LAMA1P25391 3075 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 CEP290O15078 2479 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 SHOXO15266 292 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 CDC40O60508 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMG9-211ENST00000601170 FBXO45P0C2W1 286 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 FAUP35544 74 aaKnown RBP13.05□□□□□ -0.32
SMG9-211ENST00000601170 POU3F4P49335 361 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 SLC17A1Q14916 467 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 ACKR1Q16570 336 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 DEFB133Q30KQ1 61 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 PRAMEF17Q5VTA0 474 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 MAMDC2Q7Z304 686 aaPredicted RBP13.05□□□□□ -0.32
SMG9-211ENST00000601170 COMMD7Q86VX2 200 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
SMG9-211ENST00000601170 SLC22A13Q9Y226 551 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 MAB21L2Q9Y586 359 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 CACNA1CQ13936 2221 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 PCNX3Q9H6A9 2034 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 PRSS37A4D1T9 235 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 H3BMH7 237 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 HRGP04196 525 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 SPARCP09486 303 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 PGCP20142 388 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 RPL27P61353 136 aaKnown RBP13.05□□□□□ -0.32
SMG9-211ENST00000601170 GUCA2AQ02747 115 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 PLCXD2Q0VAA5 305 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 OPCMLQ14982 345 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 RBMS2Q15434 407 aaKnown RBP13.05□□□□□ -0.32
SMG9-211ENST00000601170 ELAVL1Q15717 326 aaKnown RBP13.05□□□□□ -0.32
SMG9-211ENST00000601170 SGCBQ16585 318 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 YOD1Q5VVQ6 348 aaPredicted RBP13.05□□□□□ -0.32
SMG9-211ENST00000601170 HLA-DQA1Q5Y7H0 255 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 FDX2Q6P4F2 183 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 BIVMQ86UB2 503 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 OR4D10Q8NGI6 311 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 FAM174AQ8TBP5 190 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 RELTQ969Z4 430 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 ELMOD3Q96FG2 381 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 WDR89Q96FK6 387 aaPredicted RBP13.05□□□□□ -0.32
SMG9-211ENST00000601170 GINS4Q9BRT9 223 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 TBL1XR1Q9BZK7 514 aa13.05□□□□□ -0.32
SMG9-211ENST00000601170 IGHV1OR15-9A0A0B4J2B8 117 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 CIB4A0PJX0 185 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 ZSCAN5BA6NJL1 495 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 ALG1L2C9J202 215 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 I3L521 148 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 TSPAN2O60636 221 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 SLC16A7O60669 478 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 KDM4BO94953 1096 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 OR6A2O95222 327 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 PNPP00491 289 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 PDGFAP04085 211 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 CSF1P09603 554 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 VSIG10L2P0DP72 767 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 GP1BBP13224 206 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 CXCL2P19875 107 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 CFPP27918 469 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 CD38P28907 300 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 DCAF7P61962 342 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 INSM1Q01101 510 aaPredicted RBP13.04□□□□□ -0.32
SMG9-211ENST00000601170 DHODHQ02127 395 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 ETFDHQ16134 617 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 CSRP2Q16527 193 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 OR5M10Q6IEU7 315 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 NHLRC1Q6VVB1 395 aa13.04□□□□□ -0.32
SMG9-211ENST00000601170 ZNF679Q8IYX0 411 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms