RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 Q6ZT83 130 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 ABHD12BQ7Z5M8 362 aaPredicted RBP10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 WDFY1Q8IWB7 410 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 DHRSXQ8N5I4 330 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 CNEP1R1Q8N9A8 125 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 NOXO1Q8NFA2 376 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 LILRB4Q8NHJ6 448 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 TFAP2CQ92754 450 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 HDAC2Q92769 488 aaKnown RBP10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 RASD2Q96D21 266 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 SLC38A2Q96QD8 506 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 ADI1Q9BV57 179 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 NMNAT2Q9BZQ4 307 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 GLTPQ9NZD2 209 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 COQ3Q9NZJ6 369 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 PROCRQ9UNN8 238 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 RNF6Q9Y252 685 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 HSPE1-MOB4S4R3N1 261 aa10.27□□□□□ -0.77
CHMP2A-207ENST00000600804 NKX2-6A6NCS4 301 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 RIIAD1A6NNX1 92 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 M0R3G1 203 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 MPZL2O60487 215 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 SERPINI2O75830 405 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 COX5AP20674 150 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 CAPGP40121 348 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 CDKN2AP42771 156 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 CSNK1A1P48729 337 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 CENPAP49450 140 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 SLC25A1P53007 311 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 AQP4P55087 323 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 SNRPGP62308 76 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 ITGADQ13349 1161 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 TOP3AQ13472 1001 aaPredicted RBP10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 ZIK1Q3SY52 487 aaPredicted RBP10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 TSPO2Q5TGU0 170 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 VWA1Q6PCB0 445 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 LRFN4Q6PJG9 635 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 BEND4Q6ZU67 534 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 PTCHD4Q6ZW05 846 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 ZNF627Q7L945 461 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 ZBTB46Q86UZ6 589 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 JAZF1Q86VZ6 243 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 ZNF100Q8IYN0 542 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 GABRG1Q8N1C3 465 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 DEPDC4Q8N2C3 294 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 IQCF1Q8N6M8 205 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 ZNF555Q8NEP9 628 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 OR8J1Q8NGP2 316 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 RBP7Q96R05 134 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 EMC6Q9BV81 110 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 RACGAP1Q9H0H5 632 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 B3GAT2Q9NPZ5 323 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 FKBP7Q9Y680 259 aa10.26□□□□□ -0.77
CHMP2A-207ENST00000600804 PRR14LQ5THK1 2151 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 RTTNQ86VV8 2226 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 ARHGEF9O43307 516 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 RENP00797 406 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 BMP5P22003 454 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 EDNRAP25101 427 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 MPGP29372 298 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 CRABP1P29762 137 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 ART1P52961 327 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 SH3BGRP55822 239 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 CLRN1P58418 232 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 SIRPAP78324 504 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 P2RY6Q15077 328 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 SNAPC1Q16533 368 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 SLC35F1Q5T1Q4 408 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 TMEM236Q5W0B7 351 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 DNM1P34Q6PK57 102 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 SLC25A47Q6Q0C1 308 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 FOXL2NBQ6ZUU3 175 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 USP51Q70EK9 711 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 CCDC71Q8IV32 467 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 LIX1LQ8IVB5 337 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 GPR137CQ8N3F9 429 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 RELL2Q8NC24 303 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 SLC37A3Q8NCC5 494 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 OR52E2Q8NGJ4 325 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 OR6N1Q8NGY5 312 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 OR4K13Q8NH42 304 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 MCHR2Q969V1 340 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 ZNF184Q99676 751 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 APOL4Q9BPW4 351 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 SLC7A10Q9NS82 523 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 ASB6Q9NWX5 421 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 ELOVL5Q9NYP7 299 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 TVP23BQ9NYZ1 205 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 RAB26Q9ULW5 256 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 GMPPBQ9Y5P6 360 aa10.25□□□□□ -0.77
CHMP2A-207ENST00000600804 ZANQ9Y493 2812 aa10.24□□□□□ -0.77
CHMP2A-207ENST00000600804 OR6C68A6NDL8 312 aa10.24□□□□□ -0.77
CHMP2A-207ENST00000600804 ZNF587BE7ETH6 402 aa10.24□□□□□ -0.77
CHMP2A-207ENST00000600804 UPK3AO75631 287 aa10.24□□□□□ -0.77
CHMP2A-207ENST00000600804 HOXB1P14653 301 aaPredicted RBP10.24□□□□□ -0.77
CHMP2A-207ENST00000600804 PAICSP22234 425 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms