RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	TUBA4A	P68366	448 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	TRAP1	Q12931	704 aa	Known RBP	7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	BNIP1	Q12981	228 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	EFNB3	Q15768	340 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	ADIPOQ	Q15848	244 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	ETFDH	Q16134	617 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	MSMP	Q1L6U9	139 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	THEM4	Q5T1C6	240 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	FAM27B	Q5VT28	67 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	CARD17	Q5XLA6	110 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	C1orf94	Q6P1W5	598 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	SLC22A25	Q6T423	547 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	ZNF730	Q6ZMV8	503 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	TUBA1A	Q71U36	451 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	DPPA2	Q7Z7J5	298 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	OAF	Q86UD1	273 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	CYP4Z1	Q86W10	505 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	SLC22A24	Q8N4F4	322 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	OR4F15	Q8NGB8	312 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	OR6N1	Q8NGY5	312 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	OR51A7	Q8NH64	312 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	POP5	Q969H6	163 aa	Known RBP	7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628		Q96MF0	132 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	DDO	Q99489	341 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	TRIM15	Q9C019	465 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	GSX1	Q9H4S2	264 aa	Predicted RBP	7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	ZNF442	Q9H7R0	627 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	CBLN4	Q9NTU7	201 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	FAIM	Q9NVQ4	179 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	ZNF346	Q9UL40	294 aa	Known RBP	7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	MOK	Q9UQ07	419 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	ADAM18	Q9Y3Q7	739 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	LYVE1	Q9Y5Y7	322 aa		7.61	□□□□□ -1.19
SSBP4-208	ENST00000600628	ARPC3	O15145	178 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SERPINI2	O75830	405 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	KRT36	O76013	467 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SEC14L2	O76054	403 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	GADD45G	O95257	159 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SNAP29	O95721	258 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	IGHV4-39	P01824	125 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SERPINA5	P05154	406 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	FABP3	P05413	133 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	INHBB	P09529	407 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	OR8G3P	P0DMU2	310 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SAG	P10523	405 aa	Predicted RBP	7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	NR4A1	P22736	598 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	FPR3	P25089	353 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	APOBEC3A	P31941	199 aa	Predicted RBP	7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	ATP5J2	P56134	94 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SMIM11A	P58511	58 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	IL1RL1	Q01638	556 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	FMOD	Q06828	376 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	GSG1	Q2KHT4	349 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	MEST	Q5EB52	335 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	AGAP6	Q5VW22	663 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	CYP2R1	Q6VVX0	501 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	BIVM	Q86UB2	503 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	ZDHHC21	Q8IVQ6	265 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	DEPDC4	Q8N2C3	294 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	CIART	Q8N365	385 aa	Predicted RBP	7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	MUC15	Q8N387	334 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	CLDN22	Q8N7P3	220 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SYT14	Q8NB59	555 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	FNDC8	Q8TC99	324 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	TRMT61A	Q96FX7	289 aa	Known RBP	7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	FAM46A	Q96IP4	442 aa	Known RBP	7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	CLPTM1L	Q96KA5	538 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	COX4I2	Q96KJ9	171 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	BTBD10	Q9BSF8	475 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	BDH2	Q9BUT1	245 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SIAE	Q9HAT2	523 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	CA10	Q9NS85	328 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	VNN3	Q9NY84	501 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	VSX1	Q9NZR4	365 aa	Predicted RBP	7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	POFUT2	Q9Y2G5	429 aa		7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	SON	P18583	2426 aa	Known RBP	7.6	□□□□□ -1.19
SSBP4-208	ENST00000600628	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	7.6	□□□□□ -1.19	5e-10	■■■□□ 18.9
SSBP4-208	ENST00000600628	TCRBV3S1	A0A5B6	114 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	SLC22A23	A1A5C7	686 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	PRSS37	A4D1T9	235 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	TRIM64	A6NGJ6	449 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	TRIM64B	A6NI03	449 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628		A6NIZ1	184 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	AQP12B	A6NM10	295 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628		H7C1Q1	480 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	IMPA2	O14732	288 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	NDUFS7	O75251	213 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	ENTPD5	O75356	428 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	GMNN	O75496	209 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	UBL3	O95164	117 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	NDUFB2	O95178	105 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	SLC2A10	O95528	541 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	CRYAA	P02489	173 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	TP53	P04637	393 aa	Predicted RBP	7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	SCG5	P05408	212 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	NR2C1	P13056	603 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	SDHA	P31040	664 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	RRM2	P31350	389 aa		7.59	□□□□□ -1.19
SSBP4-208	ENST00000600628	GIPR	P48546	466 aa		7.59	□□□□□ -1.19

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