RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 RIPK1Q13546 671 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 GINS1Q14691 196 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 SLC35F1Q5T1Q4 408 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 LPCAT4Q643R3 524 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 ACSM5Q6NUN0 579 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 ZBTB49Q6ZSB9 765 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 ADCK1Q86TW2 530 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 TGIF2LYQ8IUE0 185 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 ZNF433Q8N7K0 673 aaPredicted RBP16.56■□□□□ 0.24
CCDC9-205ENST00000600117 GABARAPL3Q9BY60 117 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 ULBP2Q9BZM5 246 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 TAS2R16Q9NYV7 291 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 VSX1Q9NZR4 365 aaPredicted RBP16.56■□□□□ 0.24
CCDC9-205ENST00000600117 IGKV1D-43A0A0B4J1Z2 117 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 SLC22A23A1A5C7 686 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 PRSS37A4D1T9 235 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 ZNF587BE7ETH6 402 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 AHCYL1O43865 530 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 LYZL6O75951 148 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 KRT33AO76009 404 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 IGFBP2P18065 325 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 GRK5P34947 590 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 POLR2IP36954 125 aaKnown RBP16.55■□□□□ 0.24
CCDC9-205ENST00000600117 MYBPC1Q00872 1141 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 FMODQ06828 376 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 TSC22D1Q15714 1073 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 CEACAM16Q2WEN9 425 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 SFRP5Q5T4F7 317 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 OGFRL1Q5TC84 451 aaPredicted RBP16.55■□□□□ 0.24
CCDC9-205ENST00000600117 TMEM236Q5W0B7 351 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 SLC25A47Q6Q0C1 308 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 ABHD12BQ7Z5M8 362 aaPredicted RBP16.55■□□□□ 0.24
CCDC9-205ENST00000600117 OR4K13Q8NH42 304 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 MCHR2Q969V1 340 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 SNX18Q96RF0 628 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 DDOQ99489 341 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 CXXC4Q9H2H0 198 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 CRLF2Q9HC73 371 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 B3GAT2Q9NPZ5 323 aa16.55■□□□□ 0.24
CCDC9-205ENST00000600117 HRNRQ86YZ3 2850 aaPredicted RBP16.55■□□□□ 0.24
CCDC9-205ENST00000600117 ZAR1LA6NP61 321 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 E9PQ18 207 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 XKRYO14609 159 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 QDPRP09417 244 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 NOS3P29474 1203 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 UGT2B10P36537 528 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC9-205ENST00000600117 CD47Q08722 323 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 PTGES3Q15185 160 aaKnown RBP16.54■□□□□ 0.24
CCDC9-205ENST00000600117 STK11Q15831 433 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 LRRC36Q1X8D7 754 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 C10orf128Q5T292 105 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 C9orf135Q5VTT2 229 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 SLC27A4Q6P1M0 643 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 NPEPL1Q8NDH3 523 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 LRRC46Q96FV0 321 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 NMNAT3Q96T66 252 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 ENOPH1Q9UHY7 261 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 GPR52Q9Y2T5 361 aa16.54■□□□□ 0.24
CCDC9-205ENST00000600117 C16orf97H3BN30 126 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 DHHO43323 396 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 SLC2A10O95528 541 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 ATP6V1G2O95670 118 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 ARF1P84077 181 aaKnown RBP16.53■□□□□ 0.24
CCDC9-205ENST00000600117 SORDQ00796 357 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 NPRL3Q12980 569 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 GABRA6Q16445 453 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 THEM4Q5T1C6 240 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 SLX4IPQ5VYV7 408 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 LEG1Q6P5S2 330 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 SDR9C7Q8NEX9 313 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 OR52E2Q8NGJ4 325 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 FNDC8Q8TC99 324 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 KISS1RQ969F8 398 aaPredicted RBP16.53■□□□□ 0.24
CCDC9-205ENST00000600117 MBOAT4Q96T53 435 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 FOXC2Q99958 501 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 SYT4Q9H2B2 425 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 NELFAQ9H3P2 528 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 CMC2Q9NRP2 79 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 UGT2A1Q9Y4X1 527 aa16.53■□□□□ 0.24
CCDC9-205ENST00000600117 OR6C68A6NDL8 312 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 DLGAP1O14490 977 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 NR2C1P13056 603 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 RAD23AP54725 363 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 SH3BGRP55822 239 aaPredicted RBP16.52■□□□□ 0.24
CCDC9-205ENST00000600117 ZIK1Q3SY52 487 aaPredicted RBP16.52■□□□□ 0.24
CCDC9-205ENST00000600117 ZNF627Q7L945 461 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 BHLHA15Q7RTS1 189 aaPredicted RBP16.52■□□□□ 0.24
CCDC9-205ENST00000600117 JAZF1Q86VZ6 243 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 PACRGLQ8N7B6 248 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 SLC37A3Q8NCC5 494 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 OR1K1Q8NGR3 316 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 NRG4Q8WWG1 115 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 BOD1Q96IK1 185 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 MUS81Q96NY9 551 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 RBP7Q96R05 134 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 HDHD5Q9BXW7 423 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 OR10A4Q9H209 315 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 RIBC2Q9H4K1 309 aa16.52■□□□□ 0.24
CCDC9-205ENST00000600117 C8orf4Q9NR00 106 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms