RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	OTULIN	Q96BN8	352 aa		19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	IL4I1	Q96RQ9	567 aa		19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	MRPL13	Q9BYD1	178 aa	Known RBP	19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	ANKRD60	Q9BZ19	345 aa		19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	SLCO5A1	Q9H2Y9	848 aa		19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	ASB6	Q9NWX5	421 aa		19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	VSX1	Q9NZR4	365 aa	Predicted RBP	19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	FOXD3	Q9UJU5	478 aa	Predicted RBP	19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	GPR52	Q9Y2T5	361 aa		19.36	■□□□□ 0.69
LTBP4-227	ENST00000600026	LRRK2	Q5S007	2527 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	SLC22A23	A1A5C7	686 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026		M0R129	80 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	KRT33A	O76009	404 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	CD79B	P40259	229 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	SNRPG	P62308	76 aa	Known RBP	19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	THEM4	Q5T1C6	240 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	TSPO2	Q5TGU0	170 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	DNM1P34	Q6PK57	102 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	THAP5	Q7Z6K1	395 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	CPO	Q8IVL8	374 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	WDFY1	Q8IWB7	410 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	C20orf196	Q8IYI0	205 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	ENTHD1	Q8IYW4	607 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	GABRG1	Q8N1C3	465 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	POMGNT2	Q8NAT1	580 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	TMEM54	Q969K7	222 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	LINC00470	Q9BZP3	86 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	ELOVL5	Q9NYP7	299 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	ZNF226	Q9NYT6	803 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	GLTP	Q9NZD2	209 aa		19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	H2AFY2	Q9P0M6	372 aa	Predicted RBP	19.35	■□□□□ 0.69
LTBP4-227	ENST00000600026	OR6C68	A6NDL8	312 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	GNAO1	P09471	354 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	MYF6	P23409	242 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	CRABP1	P29762	137 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	EFNB1	P98172	346 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	FAM27E3	Q08E93	113 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	FBXW9	Q5XUX1	488 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026		Q6ZT83	130 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	UBE2J2	Q8N2K1	259 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	RHOXF1	Q8NHV9	184 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026		Q96MT0	163 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	DDO	Q99489	341 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	SYT4	Q9H2B2	425 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	HINT3	Q9NQE9	182 aa	Known RBP	19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	RPRD1B	Q9NQG5	326 aa	Known RBP	19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	RASSF1	Q9NS23	344 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	SLC7A10	Q9NS82	523 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	CLN6	Q9NWW5	311 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	UPB1	Q9UBR1	384 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	ICE1	Q9Y2F5	2266 aa		19.34	■□□□□ 0.69
LTBP4-227	ENST00000600026	TEX15	Q9BXT5	2789 aa		19.33	■□□□□ 0.69
LTBP4-227	ENST00000600026	FAM183A	A6NL82	134 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	DENR	O43583	198 aa	Known RBP	19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	CNOT4	O95628	575 aa	Known RBP	19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	CCKAR	P32238	428 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	SLC25A1	P53007	311 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	LGALS3BP	Q08380	585 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	MAD2L1BP	Q15013	274 aa	Predicted RBP	19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	HIST3H3	Q16695	136 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	MEDAG	Q5VYS4	303 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	PLBD1	Q6P4A8	553 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	OR2T4	Q8NH00	348 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	UBE2F	Q969M7	185 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	CNBD2	Q96M20	576 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	ULBP2	Q9BZM5	246 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	MALT1	Q9UDY8	824 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	LRRC42	Q9Y546	428 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	FKBP7	Q9Y680	259 aa		19.33	■□□□□ 0.68
LTBP4-227	ENST00000600026	UPK3A	O75631	287 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	QDPR	P09417	244 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	ISL1	P61371	349 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	FAP	Q12884	760 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	MED21	Q13503	144 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	OCLN	Q16625	522 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	SLC25A30	Q5SVS4	291 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	HIST2H2BC	Q6DN03	193 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	KRT80	Q6KB66	452 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	STAC2	Q6ZMT1	411 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	CXorf67	Q86X51	503 aa	Predicted RBP	19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	GID4	Q8IVV7	300 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	OR9Q1	Q8NGQ5	310 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	MCHR2	Q969V1	340 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	ALKBH3	Q96Q83	286 aa	Predicted RBP	19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	NMNAT2	Q9BZQ4	307 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	RERGL	Q9H628	205 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	MED20	Q9H944	212 aa		19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	SRA1	Q9HD15	236 aa	Known RBP	19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	PLEKHB1	Q9UF11	243 aa	Predicted RBP	19.32	■□□□□ 0.68
LTBP4-227	ENST00000600026	SNTN	A6NMZ2	147 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	SLC16A7	O60669	478 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	KHDRBS3	O75525	346 aa	Known RBP	19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	IGFBP2	P18065	325 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	COX5A	P20674	150 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	IGHV1-2	P23083	117 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	ZNF84	P51523	738 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	SORD	Q00796	357 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	NXNL2	Q5VZ03	156 aa		19.31	■□□□□ 0.68
LTBP4-227	ENST00000600026	PROKR2	Q8NFJ6	384 aa		19.31	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms