RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 C20orf141Q9NUB4 165 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF224Q9NZL3 707 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF229Q9UJW7 825 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 BAG5Q9UL15 447 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 PIP5K1CO60331 668 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
SCAF1-203ENST00000598359 F13BP05160 661 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 RPSAP08865 295 aaKnown RBP11.9□□□□□ -0.5
SCAF1-203ENST00000598359 BMP4P12644 408 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 KDELR2P33947 212 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 HSPA13P48723 471 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 LSM11P83369 360 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCAF1-203ENST00000598359 RUNX1T1Q06455 604 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 ZP4Q12836 540 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 CHD3Q12873 2000 aaKnown RBP11.9□□□□□ -0.5
SCAF1-203ENST00000598359 SNTB2Q13425 540 aaKnown RBP11.9□□□□□ -0.5
SCAF1-203ENST00000598359 MSMPQ1L6U9 139 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 GSG1Q2KHT4 349 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 ERICH5Q6P6B1 374 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 LRFN4Q6PJG9 635 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 MEX3DQ86XN8 651 aaKnown RBP11.9□□□□□ -0.5
SCAF1-203ENST00000598359 MICU2Q8IYU8 434 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 SVOPLQ8N434 492 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 OR4F15Q8NGB8 312 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 OR6X1Q8NH79 312 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 MOSPD2Q8NHP6 518 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF75AQ96N20 296 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 NR1H4Q96RI1 486 aaPredicted RBP11.9□□□□□ -0.5
SCAF1-203ENST00000598359 FOXB1Q99853 325 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 SLC19A3Q9BZV2 496 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 GORASP2Q9H8Y8 452 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 BATF3Q9NR55 127 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 GLTPQ9NZD2 209 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 EGFL7Q9UHF1 273 aa11.9□□□□□ -0.5
SCAF1-203ENST00000598359 ELOVL7A1L3X0 281 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 SH3PXD2BA1X283 911 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 B9A039 149 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 hCG_2039718K7EN88 272 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 CD5LO43866 347 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 CRLF1O75462 422 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 OR7A10O76100 309 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 OR5F1O95221 314 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 MT-ND1P03886 318 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 FCGR1AP12314 374 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF14P17017 642 aaPredicted RBP11.89□□□□□ -0.51
SCAF1-203ENST00000598359 HOXB6P17509 224 aaKnown RBP11.89□□□□□ -0.51
SCAF1-203ENST00000598359 PAX7P23759 505 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 AQP2P41181 271 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 YAP1P46937 504 aaKnown RBP11.89□□□□□ -0.51
SCAF1-203ENST00000598359 GIPRP48546 466 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 AQP4P55087 323 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 DSCR9P59020 149 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 MYBPC1Q00872 1141 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 RPL18Q07020 188 aaKnown RBP11.89□□□□□ -0.51
SCAF1-203ENST00000598359 BLMHQ13867 455 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 DAG1Q14118 895 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 RAB39AQ14964 217 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF627Q7L945 461 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 VTCN1Q7Z7D3 282 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 SKA3Q8IX90 412 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 CCDC36Q8IYA8 594 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 CDK20Q8IZL9 346 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 SYT14Q8NB59 555 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 NUP37Q8NFH4 326 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 TMEM239Q8WW34 195 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF566Q969W8 418 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 SGTBQ96EQ0 304 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 SLC25A44Q96H78 314 aaPredicted RBP11.89□□□□□ -0.51
SCAF1-203ENST00000598359 SH3GL3Q99963 347 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 MOV10Q9HCE1 1003 aaKnown RBP11.89□□□□□ -0.51
SCAF1-203ENST00000598359 RHCGQ9UBD6 479 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 ARFGEF3Q5TH69 2177 aa11.89□□□□□ -0.51
SCAF1-203ENST00000598359 ABCA1O95477 2261 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 TMEM129A0AVI4 362 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 J3KTA2 159 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 BCL10O95999 233 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 IFNA14P01570 189 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 QDPRP09417 244 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 PGA4P0DJD7 388 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 PGA3P0DJD8 388 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF26P17031 533 aaPredicted RBP11.88□□□□□ -0.51
SCAF1-203ENST00000598359 NPR2P20594 1047 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 RBM34P42696 430 aaKnown RBP11.88□□□□□ -0.51
SCAF1-203ENST00000598359 RAB1AP62820 205 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 LAPTM4AQ15012 233 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 EFNB3Q15768 340 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 TMEM249Q2WGJ8 235 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 GLYATQ6IB77 296 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 PACRGLQ8N7B6 248 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 ICA1LQ8NDH6 482 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 LRTOMTQ8WZ04 291 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 NSMCE2Q96MF7 247 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 TNFRSF13CQ96RJ3 184 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF347Q96SE7 839 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 VCXQ9H320 206 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 C8orf4Q9NR00 106 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 RAB26Q9ULW5 256 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 FZR1Q9UM11 496 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 A4GNTQ9UNA3 340 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms