RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 HDDC2Q7Z4H3 204 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 THAP5Q7Z6K1 395 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 ADCK1Q86TW2 530 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 NPEPL1Q8NDH3 523 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 SDR9C7Q8NEX9 313 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 TMEM163Q8TC26 289 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 APH1AQ96BI3 265 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 CNBD2Q96M20 576 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 ADAD1Q96M93 576 aaKnown RBP13.21□□□□□ -0.29
TRIM28-207ENST00000597136 NMNAT3Q96T66 252 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 DDOQ99489 341 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 RASSF1Q9NS23 344 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 SLC7A10Q9NS82 523 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 GPR52Q9Y2T5 361 aa13.21□□□□□ -0.29
TRIM28-207ENST00000597136 PRSS37A4D1T9 235 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 ZNF726A6NNF4 738 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 ARHGEF9O43307 516 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 MPZL2O60487 215 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 ZNF3P17036 446 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 CCKARP32238 428 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 UGT2B10P36537 528 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 CD47Q08722 323 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 ITGADQ13349 1161 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 CRMP1Q14194 572 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 MAD2L1BPQ15013 274 aaPredicted RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 NIPAL3Q6P499 406 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 LEG1Q6P5S2 330 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 JAZF1Q86VZ6 243 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 CXorf67Q86X51 503 aaPredicted RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 CYB561A3Q8NBI2 242 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 SLC37A3Q8NCC5 494 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 FBLIM1Q8WUP2 373 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 HDAC2Q92769 488 aaKnown RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 TMEM45BQ96B21 275 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 SLC25A44Q96H78 314 aaPredicted RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 OR2M2Q96R28 347 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 MRPL13Q9BYD1 178 aaKnown RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 ELOVL5Q9NYP7 299 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 AASSQ9UDR5 926 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 FOXD3Q9UJU5 478 aaPredicted RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 RCE1Q9Y256 329 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 ANKRD17O75179 2603 aaKnown RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 NAV2Q8IVL1 2488 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 DSCAMO60469 2012 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 OR6C68A6NDL8 312 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 H7C1C5 153 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 TRMUO75648 421 aaKnown RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 IGHV1-2P23083 117 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 LCN6P62502 163 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 FAPQ12884 760 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 MED21Q13503 144 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 CAMK2DQ13557 499 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 SLC25A30Q5SVS4 291 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 FBXW9Q5XUX1 488 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 Q6ZT83 130 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 LINGO2Q7L985 606 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 TMEM123Q8N131 208 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 UBE2J2Q8N2K1 259 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 PTP4A1Q93096 173 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 LRRC46Q96FV0 321 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 SNX18Q96RF0 628 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 KCNK17Q96T54 332 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 SPOCK3Q9BQ16 436 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 FN3KQ9H479 309 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 HINT3Q9NQE9 182 aaKnown RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 PARPBPQ9NWS1 579 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 UBAP1Q9NZ09 502 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 VSX1Q9NZR4 365 aaPredicted RBP13.2□□□□□ -0.3
TRIM28-207ENST00000597136 CRIM1Q9NZV1 1036 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 PCDHGB5Q9Y5G0 923 aa13.2□□□□□ -0.3
TRIM28-207ENST00000597136 NOTCH2Q04721 2471 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 FAM183AA6NL82 134 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 PRR23D1E9PI22 279 aaPredicted RBP13.19□□□□□ -0.3
TRIM28-207ENST00000597136 C16orf97H3BN30 126 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 AKAP8O43823 692 aaKnown RBP13.19□□□□□ -0.3
TRIM28-207ENST00000597136 AHCYL1O43865 530 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 WBP4O75554 376 aaKnown RBP13.19□□□□□ -0.3
TRIM28-207ENST00000597136 UPK3AO75631 287 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 LYZL6O75951 148 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 IGHG1P01857 330 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 PGA4P0DJD7 388 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 PGA3P0DJD8 388 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 PRR23D2P0DMB1 279 aaPredicted RBP13.19□□□□□ -0.3
TRIM28-207ENST00000597136 COX6B1P14854 86 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 PAICSP22234 425 aaKnown RBP13.19□□□□□ -0.3
TRIM28-207ENST00000597136 CDK5R2Q13319 367 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 PHYHD1Q5SRE7 291 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 C9orf135Q5VTT2 229 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 CARD17Q5XLA6 110 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 PLBD1Q6P4A8 553 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 CXXC5Q7LFL8 322 aaKnown RBP13.19□□□□□ -0.3
TRIM28-207ENST00000597136 BCDIN3DQ7Z5W3 292 aaKnown RBP13.19□□□□□ -0.3
TRIM28-207ENST00000597136 ZNF295-AS1Q8N0V1 137 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 SYT14Q8NB59 555 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 CNIH3Q8TBE1 160 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 APH1BQ8WW43 257 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 ZNF566Q969W8 418 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 LRR1Q96L50 414 aa13.19□□□□□ -0.3
TRIM28-207ENST00000597136 WFIKKN1Q96NZ8 548 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms