RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 AGAP6Q5VW22 663 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 ZNF544Q6NX49 715 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 TMEM53Q6P2H8 277 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 ADGRG5Q8IZF4 528 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 OR4F15Q8NGB8 312 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 FANK1Q8TC84 345 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 NEUROG1Q92886 237 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 RNF121Q9H920 327 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 SIAEQ9HAT2 523 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 NRIP3Q9NQ35 241 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 LAMP3Q9UQV4 416 aa15.05■□□□□ -0
SHKBP1-212ENST00000596163 SAMHD1Q9Y3Z3 626 aaKnown RBP15.05■□□□□ -0
SHKBP1-212ENST00000596163 IMPA2O14732 288 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 CST1P01037 141 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 CECR9P0C854 216 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 APEHP13798 732 aaKnown RBP15.04■□□□□ -0
SHKBP1-212ENST00000596163 SDHAP31040 664 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 GSSP48637 474 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 FABP6P51161 128 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 IDH3GP51553 393 aaPredicted RBP15.04■□□□□ -0
SHKBP1-212ENST00000596163 MRPS34P82930 218 aaKnown RBP15.04■□□□□ -0
SHKBP1-212ENST00000596163 NAAAQ02083 359 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 PIGFQ07326 219 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 NPRL3Q12980 569 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 RPL13AP3Q6NVV1 102 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 PGBD2Q6P3X8 592 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 SLC25A47Q6Q0C1 308 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 SPNS3Q6ZMD2 512 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 SLC16A14Q7RTX9 510 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 SKA3Q8IX90 412 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 FBXL14Q8N1E6 418 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 OR4C15Q8NGM1 316 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 CANT1Q8WVQ1 401 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 NSMAFQ92636 917 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 NMD3Q96D46 503 aaKnown RBP15.04■□□□□ -0
SHKBP1-212ENST00000596163 Q96M85 177 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 GPA33Q99795 319 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 GRIP2Q9C0E4 1043 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 MOKQ9UQ07 419 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 ADAM18Q9Y3Q7 739 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 IER3IP1Q9Y5U9 82 aa15.04■□□□□ -0
SHKBP1-212ENST00000596163 E7EQL1 145 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 ATP6V1G2-DDX39BF2Z307 99 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 SLC2A10O95528 541 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 PTHP01270 115 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 DANCRP0C864 163 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 BMP4P12644 408 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 ZNF26P17031 533 aaPredicted RBP15.03■□□□□ -0
SHKBP1-212ENST00000596163 APOBEC3AP31941 199 aaPredicted RBP15.03■□□□□ -0
SHKBP1-212ENST00000596163 GIPRP48546 466 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 PTDSS1P48651 473 aaKnown RBP15.03■□□□□ -0
SHKBP1-212ENST00000596163 SPOCK1Q08629 439 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 MICAQ29983 383 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 CCDC121Q6ZUS5 278 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 FAM122BQ7Z309 247 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 ADCK1Q86TW2 530 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 GTPBP3Q969Y2 492 aaKnown RBP15.03■□□□□ -0
SHKBP1-212ENST00000596163 OR52D1Q9H346 318 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 SLC7A8Q9UHI5 535 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 SPEF1Q9Y4P9 236 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 CCDC168Q8NDH2 2452 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 AKAP6Q13023 2319 aa15.03■□□□□ -0
SHKBP1-212ENST00000596163 ALPK2Q86TB3 2170 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 TEX13CA0A0J9YWL9 993 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 TCRBV3S1A0A5B6 114 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 SLC22A23A1A5C7 686 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 PRSS37A4D1T9 235 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 IDH3BO43837 385 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 TXNDC12O95881 172 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 GSTM3P21266 225 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 TTKP33981 857 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 NKX6-1P78426 367 aaPredicted RBP15.02■□□□□ -0
SHKBP1-212ENST00000596163 PLP2Q04941 152 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 FMODQ06828 376 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 KRR1Q13601 381 aaKnown RBP15.02■□□□□ -0
SHKBP1-212ENST00000596163 SGCAQ16586 387 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 PGGHGQ32M88 737 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 SHEQ5VZ18 495 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 THSD4Q6ZMP0 1018 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 MUC15Q8N387 334 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 OR52L1Q8NGH7 329 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 TRMT61AQ96FX7 289 aaKnown RBP15.02■□□□□ -0
SHKBP1-212ENST00000596163 ERMAPQ96PL5 475 aaPredicted RBP15.02■□□□□ -0
SHKBP1-212ENST00000596163 SH3GL3Q99963 347 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 IFT27Q9BW83 186 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 GSX2Q9BZM3 304 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 LRMDAQ9H2I8 198 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 C1orf198Q9H425 327 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 SEC61A2Q9H9S3 476 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 CCNB1IP1Q9NPC3 277 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 IL20RAQ9UHF4 553 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 U3KQV3 271 aa15.02■□□□□ -0
SHKBP1-212ENST00000596163 PRR14LQ5THK1 2151 aa15.02□□□□□ -0.01
SHKBP1-212ENST00000596163 HRNRQ86YZ3 2850 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-212ENST00000596163 ZNF503-AS2A6NEH8 195 aa15.01□□□□□ -0.01
SHKBP1-212ENST00000596163 ARPC3O15145 178 aa15.01□□□□□ -0.01
SHKBP1-212ENST00000596163 GASTP01350 101 aa15.01□□□□□ -0.01
SHKBP1-212ENST00000596163 SOD3P08294 240 aa15.01□□□□□ -0.01
SHKBP1-212ENST00000596163 PAX1P15863 534 aa15.01□□□□□ -0.01
SHKBP1-212ENST00000596163 NOS3P29474 1203 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms